Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 AL138781.1-201ENST00000566567 1274 ntBASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TCRBV9S1A1TA0A576 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.21■□□□□ 0.67
TCRBV9S1A1TA0A576 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 AC018470.1-201ENST00000624790 3129 ntBASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 AL354751.1-201ENST00000412768 1863 ntBASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 GAMT-205ENST00000640762 751 ntTSL 5 BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TCRBV9S1A1TA0A576 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TCRBV9S1A1TA0A576 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms