Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV17A0A0B4J275 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 SPDYE15P-201ENST00000424157 909 ntBASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV17A0A0B4J275 LINC01006-201ENST00000333319 2292 ntBASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 GPAT2P1-201ENST00000444924 1672 ntBASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 HCG4P8-203ENST00000443049 980 ntBASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 MCCD1P1-208ENST00000445732 328 ntBASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 KRT126P-201ENST00000549467 1181 ntBASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.24■□□□□ 0.35
TRAV17A0A0B4J275 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 AL023284.2-201ENST00000405850 579 ntBASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 RASA4DP-201ENST00000460726 1199 ntBASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.23■□□□□ 0.35
TRAV17A0A0B4J275 MIR3180-5-201ENST00000583743 153 ntBASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms