Protein–RNA interactions for Protein: A0A0A6YYK7

TRAV19, T-cell receptor alpha variable 19 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV19A0A0A6YYK7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 AC008622.2-201ENST00000617006 1229 ntBASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 AL358472.4-201ENST00000633140 710 ntBASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV19A0A0A6YYK7 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV19A0A0A6YYK7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 CR769767.2-201ENST00000622735 460 ntBASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAV19A0A0A6YYK7 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 Z82202.1-201ENST00000623446 1880 ntBASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 AL671277.2-201ENST00000458060 996 ntBASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV19A0A0A6YYK7 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAV19A0A0A6YYK7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV19A0A0A6YYK7 TREX1-205ENST00000625293 1783 ntBASIC19.7■□□□□ 0.74
TRAV19A0A0A6YYK7 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV19A0A0A6YYK7 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV19A0A0A6YYK7 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms