Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-1A0A075B6T8 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV9-1A0A075B6T8 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
TRAV9-1A0A075B6T8 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC14.33□□□□□ -0.11
TRAV9-1A0A075B6T8 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV9-1A0A075B6T8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.11
TRAV9-1A0A075B6T8 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 AC243732.1-201ENST00000612648 864 ntBASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAV9-1A0A075B6T8 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 NARF-204ENST00000390006 1766 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 AC106820.2-201ENST00000563775 3264 ntBASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 LHPP-203ENST00000392757 840 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 SF1-220ENST00000626028 704 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 AC105233.4-201ENST00000642045 216 ntBASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
TRAV9-1A0A075B6T8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 HLA-G-202ENST00000376815 851 ntBASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 HLA-G-203ENST00000376818 1127 ntBASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 IGHV3-19-201ENST00000521488 291 ntBASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 MBP-237ENST00000579129 1052 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 AL356740.2-201ENST00000601559 647 ntBASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
TRAV9-1A0A075B6T8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms