Protein–RNA interactions for Protein: Q9NPA2

MMP25, Matrix metalloproteinase-25, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP25Q9NPA2 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 FRG1CP-201ENST00000358464 769 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 Y_RNA.9-201ENST00000362354 101 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 Y_RNA.22-201ENST00000362492 102 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 RNU6-1085P-201ENST00000363576 107 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 Y_RNA.159-201ENST00000363674 87 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 RNU1-33P-201ENST00000364249 162 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 MIR490-201ENST00000384865 128 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 SNORD17-201ENST00000390930 237 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 CALM2P3-201ENST00000400429 449 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AL590002.1-201ENST00000406554 418 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 RN7SKP140-201ENST00000411196 284 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AC097713.2-201ENST00000430199 356 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AC020550.1-201ENST00000447385 163 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AC126389.1-201ENST00000477436 290 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AC026427.2-201ENST00000506228 536 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AC074250.1-201ENST00000511117 192 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 RPS3AP4-201ENST00000555161 764 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AC027807.1-201ENST00000559921 996 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AC005951.2-201ENST00000576282 495 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AP001094.1-201ENST00000579805 193 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AC008536.2-201ENST00000607284 349 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AL589994.2-201ENST00000621124 579 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 AC110774.1-201ENST00000623567 2018 ntBASIC3.25□□□□□ -1.89
MMP25Q9NPA2 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
MMP25Q9NPA2 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 RPS4XP5-202ENST00000449995 1334 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AC118273.1-201ENST00000525324 3006 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 RNU4-35P-201ENST00000362588 141 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 Y_RNA.372-201ENST00000365599 102 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 RNU6-701P-201ENST00000384059 107 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 RNU6-74P-201ENST00000384235 107 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 MIR1-2-201ENST00000384961 85 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 MIR548F1-201ENST00000408667 84 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 USP9YP18-201ENST00000425912 695 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AL590383.1-201ENST00000428602 75 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AC005019.1-201ENST00000436455 431 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 HMGB3P12-201ENST00000438745 556 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 Z99127.3-201ENST00000448158 395 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AC013267.1-201ENST00000458227 267 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AC084357.1-201ENST00000473404 255 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AC025518.1-201ENST00000479856 347 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 RPL32P34-201ENST00000486380 400 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AC019235.1-201ENST00000503847 207 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 SNORA70.16-201ENST00000516390 95 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 SCARNA15.2-201ENST00000516409 127 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AP006245.1-201ENST00000522549 120 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AP001804.3-201ENST00000525146 880 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AL512310.1-201ENST00000548639 172 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 HMGB1P6-201ENST00000569046 646 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AC025449.1-201ENST00000603896 529 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AC007363.1-201ENST00000604736 620 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AC007179.3-201ENST00000604976 235 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AC106900.2-201ENST00000604994 317 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AC092954.2-201ENST00000609103 430 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 AC090517.2-201ENST00000614966 680 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
MMP25Q9NPA2 ELF2P3-201ENST00000445099 1506 ntBASIC3.24□□□□□ -1.89
MMP25Q9NPA2 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms