Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 TMEM167AP1-201ENST00000423409 219 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 DPPA2P1-201ENST00000428060 556 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 HMGB1P27-201ENST00000431429 603 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 BNIP3P2-201ENST00000441221 577 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 PRDX3P3-201ENST00000447765 522 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 ARL4AP2-201ENST00000507378 601 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AC010265.1-201ENST00000513509 211 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AC103843.2-201ENST00000530523 682 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AC012507.3-201ENST00000603556 477 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AC098826.3-201ENST00000603823 466 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 MIR92B-201ENST00000607575 96 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AC025034.2-201ENST00000623264 286 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AC005609.4-201ENST00000625071 447 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 SEPT14P19-203ENST00000633205 211 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 MTND5P17-201ENST00000418405 1603 ntBASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
PCGF1Q9BSM1 SRP72P2-201ENST00000344851 1979 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 UBE2L2-201ENST00000254302 429 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 RNA5SP295-201ENST00000362655 121 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 SNORA62.1-201ENST00000364287 154 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 RNU4-48P-201ENST00000365559 182 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 Y_RNA.372-201ENST00000365599 102 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 RNU6-190P-201ENST00000384154 102 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 Y_RNA.554-201ENST00000384672 102 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 RNU6-606P-201ENST00000384721 111 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 FAT1P1-201ENST00000406588 507 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 RN7SKP53-201ENST00000411337 315 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AC018644.1-201ENST00000429934 551 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 RPL23AP69-201ENST00000431134 458 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AL512844.2-201ENST00000433990 593 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 GOT2P5-201ENST00000433995 546 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 Z82210.1-201ENST00000440037 231 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 RPL23AP20-201ENST00000447965 421 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 RNU6-953P-201ENST00000459154 107 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AL160314.1-201ENST00000490836 438 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AC092185.1-201ENST00000491371 97 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 HMGN1P11-201ENST00000508668 303 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AC009646.1-201ENST00000510455 318 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 RNU6-677P-201ENST00000516914 101 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 ATP5F1P5-201ENST00000526403 760 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 OR5AL2P-201ENST00000532185 920 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 HMGB1P6-201ENST00000569046 646 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AC087499.8-201ENST00000578406 226 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 MIR3158-1-201ENST00000583596 81 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AC174048.1-201ENST00000603389 144 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AC010591.1-201ENST00000603941 649 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AL161798.1-201ENST00000604630 131 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AC008962.1-201ENST00000605729 304 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AP001330.5-201ENST00000607176 411 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AC008536.2-201ENST00000607284 349 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 RNVU1-4-201ENST00000612985 164 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AC130324.3-201ENST00000614165 542 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AL049641.1-201ENST00000441055 1948 ntBASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 ZNF439-201ENST00000304030 2622 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
PCGF1Q9BSM1 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms