Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 RNU1-55P-201ENST00000365510 158 ntBASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 FTH1P15-201ENST00000406984 280 ntBASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 AHCYP8-201ENST00000425108 209 ntBASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 AL590383.1-201ENST00000428602 75 ntBASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 AL121578.2-201ENST00000448797 447 ntBASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 RN7SL629P-201ENST00000489622 285 ntBASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 AC007751.1-201ENST00000529260 376 ntBASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 AC093732.2-201ENST00000607950 274 ntBASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 AC005562.2-201ENST00000618264 111 ntBASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 AC061999.1-201ENST00000624454 177 ntBASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 SNORD98-201ENST00000636377 67 ntBASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 AC005725.1-201ENST00000577346 2607 ntBASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 KCNJ15-201ENST00000328656 8399 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
MS4A3Q96HJ5 AL731556.1-201ENST00000394628 3711 ntBASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 Y_RNA.124-201ENST00000363339 93 ntBASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 RNU1-64P-201ENST00000365443 163 ntBASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 AL451046.2-201ENST00000403074 277 ntBASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 AL117342.1-201ENST00000404861 406 ntBASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 AL590635.1-201ENST00000406314 586 ntBASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 AL353133.1-201ENST00000407695 401 ntBASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 AC023449.1-201ENST00000454464 154 ntBASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 YRDCP3-201ENST00000456507 480 ntBASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 RPL7AP23-201ENST00000482625 776 ntBASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 RN7SL561P-201ENST00000488553 281 ntBASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 MLLT10P2-201ENST00000506434 249 ntBASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 MIR3923-201ENST00000579521 83 ntBASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 AC091193.1-201ENST00000604640 448 ntBASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 AL354718.1-201ENST00000619764 589 ntBASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
MS4A3Q96HJ5 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 EIF5AL1-201ENST00000520547 3840 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 CEP120-202ENST00000306481 4629 ntTSL 5 BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 AC026951.1-201ENST00000559530 2459 ntBASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 ST7-221ENST00000465133 2155 ntTSL 5 BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 RNU1-75P-201ENST00000347264 129 ntBASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 ARSFP1-201ENST00000398758 477 ntBASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 MIR873-201ENST00000401120 77 ntBASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 AL663061.1-201ENST00000416625 580 ntBASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 CRYGGP-201ENST00000443337 145 ntBASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 APOA2-205ENST00000468465 421 ntTSL 2 BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 AC108022.1-201ENST00000493466 478 ntBASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 AC083906.5-201ENST00000503722 328 ntBASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 RNU6-830P-201ENST00000516353 107 ntBASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 SOX9-AS1-208ENST00000529667 340 ntTSL 3 BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 AC083837.1-201ENST00000565297 2994 ntBASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MS4A3Q96HJ5 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms