Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 AC006466.1-201ENST00000438721 289 ntBASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 AC091912.1-201ENST00000511351 248 ntBASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 AP006245.1-201ENST00000522549 120 ntBASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 MRPS36P4-201ENST00000534436 298 ntBASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 AC126177.5-201ENST00000549599 178 ntBASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 AL390726.5-202ENST00000564800 256 ntBASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 AC023824.2-201ENST00000566185 400 ntBASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 AC090617.3-201ENST00000573670 475 ntBASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 MIR3691-201ENST00000578066 90 ntBASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 Z83818.1-201ENST00000603584 150 ntBASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 AL645944.1-201ENST00000603857 493 ntBASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.26□□□□□ -1.57
PCDHB11Q9Y5F2 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 RNU6-428P-201ENST00000362942 107 ntBASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 Y_RNA.123-201ENST00000363338 102 ntBASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 TRAV9-2-201ENST00000390441 394 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 SRSF1P1-201ENST00000424058 520 ntBASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 AC079780.1-201ENST00000428259 207 ntBASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 RPL21P40-201ENST00000428586 483 ntBASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 GSTM5P1-201ENST00000434751 660 ntBASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 AL589765.3-201ENST00000446084 462 ntBASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 AC009963.2-201ENST00000453431 138 ntBASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 MIR4659A-201ENST00000580269 81 ntBASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 AP002799.1-201ENST00000623552 423 ntBASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 AC090971.4-201ENST00000560291 1800 ntBASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.25□□□□□ -1.57
PCDHB11Q9Y5F2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 RNU4-90P-201ENST00000362773 141 ntBASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 AC108075.1-201ENST00000424692 529 ntBASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 AL590762.4-201ENST00000425885 253 ntBASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 HSPE1P25-201ENST00000455484 251 ntBASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 COX6CP14-201ENST00000469580 174 ntBASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 AC092754.1-201ENST00000472975 479 ntBASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 RPS20P22-201ENST00000473700 357 ntBASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 RN7SL591P-201ENST00000496150 292 ntBASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 SNRPCP2-201ENST00000504370 475 ntBASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 AC060766.3-201ENST00000591442 263 ntBASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 AC234771.5-201ENST00000600161 514 ntBASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 STX3-208ENST00000641815 3236 ntBASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
PCDHB11Q9Y5F2 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 AL353796.1-201ENST00000561542 3241 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 RNU6-173P-201ENST00000364215 104 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 SNORA16A-201ENST00000384342 137 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 RNA5SP339-201ENST00000390987 122 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 AL033519.2-201ENST00000403958 392 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 RNU6ATAC21P-201ENST00000408656 126 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 AC093162.1-201ENST00000419682 124 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 GAS5-208ENST00000425771 242 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 AC073850.1-201ENST00000449243 255 ntBASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC5.23□□□□□ -1.57
PCDHB11Q9Y5F2 AC108043.1-201ENST00000512696 574 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 112 ms