Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 ZNF299P-201ENST00000406845 1804 ntBASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 Y_RNA.533-201ENST00000384596 114 ntBASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 MIR129-1-201ENST00000384972 72 ntBASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 SNORA69.1-201ENST00000390904 137 ntBASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 AF186996.5-201ENST00000418098 904 ntBASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 AC007098.1-201ENST00000420122 367 ntBASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 EIF4EP2-201ENST00000422816 654 ntBASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 AC133134.1-201ENST00000466800 359 ntBASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 AC110792.1-201ENST00000491826 472 ntBASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 GMPSP1-201ENST00000514075 579 ntBASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 RNA5SP373-201ENST00000517271 95 ntBASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 SNORA81.3-201ENST00000517283 198 ntBASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 AC126177.3-201ENST00000551839 688 ntBASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 AL139124.1-201ENST00000609123 421 ntBASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 FTX_2.1-201ENST00000618816 94 ntBASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 AC073869.8-201ENST00000641806 335 ntBASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.26□□□□□ -1.57
HCN4Q9Y3Q4 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 AC083899.1-201ENST00000454465 3819 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 MIR335-201ENST00000362173 94 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 RNU6-595P-201ENST00000363944 107 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 RN7SKP202-201ENST00000410439 330 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 CRYBB2P1-203ENST00000415709 538 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 AL096701.2-201ENST00000416920 238 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 RPS12P10-201ENST00000427031 377 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 RPL23AP1-201ENST00000428990 471 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 RANP8-201ENST00000444720 713 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 NDUFB1P2-201ENST00000449477 176 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 SNORA59A-201ENST00000459326 152 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 AC087588.1-201ENST00000462203 316 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 AP000797.2-201ENST00000475768 606 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 HMGN2P13-201ENST00000476476 274 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 SUMO2P6-201ENST00000505273 288 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 RNU5B-3P-201ENST00000516601 115 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 AC068446.3-201ENST00000555285 382 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 AC005951.2-201ENST00000576282 495 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 MIR1273C-201ENST00000578669 77 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 AC008739.3-201ENST00000603262 127 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 AC008814.1-201ENST00000603797 406 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 AL161756.2-201ENST00000604597 246 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 MIR6853-201ENST00000619642 74 ntBASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.25□□□□□ -1.57
HCN4Q9Y3Q4 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 AC104964.3-201ENST00000606115 2860 ntBASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 AL157777.2-201ENST00000258070 137 ntBASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 RPL9P7-201ENST00000330965 580 ntBASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 Y_RNA.105-201ENST00000363182 111 ntBASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 SNORA36C-201ENST00000384289 132 ntBASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 RNU6-1179P-201ENST00000384667 107 ntBASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 SNORA66-201ENST00000384792 133 ntBASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 MIR634-201ENST00000385208 97 ntBASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 RNU6-837P-201ENST00000391056 108 ntBASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 SNORD58.1-201ENST00000391313 66 ntBASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 RNU6-121P-201ENST00000410525 99 ntBASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 RNU6-1203P-201ENST00000410703 110 ntBASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 RNU2-25P-201ENST00000411041 191 ntBASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 RNU2-71P-201ENST00000411395 189 ntBASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 EIF4A1P3-201ENST00000411521 244 ntBASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.24□□□□□ -1.57
HCN4Q9Y3Q4 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 9.7 ms