Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.68□□□□□ -1.5
CNKSR1Q969H4 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.68□□□□□ -1.5
CNKSR1Q969H4 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC5.68□□□□□ -1.5
CNKSR1Q969H4 AC006130.2-201ENST00000586202 326 ntBASIC5.68□□□□□ -1.5
CNKSR1Q969H4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.68□□□□□ -1.5
CNKSR1Q969H4 AC009779.6-201ENST00000603972 165 ntBASIC5.68□□□□□ -1.5
CNKSR1Q969H4 AL591034.3-201ENST00000605511 685 ntBASIC5.68□□□□□ -1.5
CNKSR1Q969H4 AL159153.1-201ENST00000619688 317 ntBASIC5.68□□□□□ -1.5
CNKSR1Q969H4 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CNKSR1Q969H4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.68□□□□□ -1.5
CNKSR1Q969H4 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CNKSR1Q969H4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNKSR1Q969H4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC5.68□□□□□ -1.5
CNKSR1Q969H4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CNKSR1Q969H4 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.68□□□□□ -1.5
CNKSR1Q969H4 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC5.68□□□□□ -1.5
CNKSR1Q969H4 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.67□□□□□ -1.5
CNKSR1Q969H4 AL136164.3-201ENST00000624429 3978 ntBASIC5.67□□□□□ -1.5
CNKSR1Q969H4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNKSR1Q969H4 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNKSR1Q969H4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CNKSR1Q969H4 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.67□□□□□ -1.5
CNKSR1Q969H4 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CNKSR1Q969H4 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.67□□□□□ -1.5
CNKSR1Q969H4 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNKSR1Q969H4 Y_RNA.416-201ENST00000384014 113 ntBASIC5.67□□□□□ -1.5
CNKSR1Q969H4 Y_RNA.480-201ENST00000384364 102 ntBASIC5.67□□□□□ -1.5
CNKSR1Q969H4 AL022722.2-201ENST00000402519 180 ntBASIC5.67□□□□□ -1.5
CNKSR1Q969H4 MIR548H3-201ENST00000408771 118 ntBASIC5.67□□□□□ -1.5
CNKSR1Q969H4 AC092809.3-201ENST00000415453 231 ntBASIC5.67□□□□□ -1.5
CNKSR1Q969H4 NEFMP1-201ENST00000443423 1006 ntBASIC5.67□□□□□ -1.5
CNKSR1Q969H4 AC069499.1-201ENST00000489433 509 ntBASIC5.67□□□□□ -1.5
CNKSR1Q969H4 AP003733.2-201ENST00000529409 171 ntBASIC5.67□□□□□ -1.5
CNKSR1Q969H4 AC068446.3-201ENST00000555285 382 ntBASIC5.67□□□□□ -1.5
CNKSR1Q969H4 AC006272.2-201ENST00000594725 163 ntBASIC5.67□□□□□ -1.5
CNKSR1Q969H4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CNKSR1Q969H4 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CNKSR1Q969H4 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 AC005005.4-201ENST00000623789 16698 ntBASIC5.66□□□□□ -1.5
CNKSR1Q969H4 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 Y_RNA.462-201ENST00000384268 102 ntBASIC5.66□□□□□ -1.5
CNKSR1Q969H4 RNU6ATAC16P-201ENST00000408591 138 ntBASIC5.66□□□□□ -1.5
CNKSR1Q969H4 RPS15AP40-201ENST00000419621 391 ntBASIC5.66□□□□□ -1.5
CNKSR1Q969H4 AC104332.1-201ENST00000440471 797 ntBASIC5.66□□□□□ -1.5
CNKSR1Q969H4 TDGF1P1-201ENST00000445734 527 ntBASIC5.66□□□□□ -1.5
CNKSR1Q969H4 snoU109.4-201ENST00000458953 143 ntBASIC5.66□□□□□ -1.5
CNKSR1Q969H4 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 RNU6-677P-201ENST00000516914 101 ntBASIC5.66□□□□□ -1.5
CNKSR1Q969H4 ERHP1-201ENST00000523006 310 ntBASIC5.66□□□□□ -1.5
CNKSR1Q969H4 AC104576.1-201ENST00000524225 88 ntBASIC5.66□□□□□ -1.5
CNKSR1Q969H4 AP006587.4-201ENST00000526053 529 ntBASIC5.66□□□□□ -1.5
CNKSR1Q969H4 FKBP1BP1-201ENST00000553366 325 ntBASIC5.66□□□□□ -1.5
CNKSR1Q969H4 MIR3910-1-201ENST00000580936 111 ntBASIC5.66□□□□□ -1.5
CNKSR1Q969H4 AC104763.2-201ENST00000604179 382 ntBASIC5.66□□□□□ -1.5
CNKSR1Q969H4 AC006329.2-201ENST00000611491 394 ntBASIC5.66□□□□□ -1.5
CNKSR1Q969H4 AC091903.1-201ENST00000624322 454 ntBASIC5.66□□□□□ -1.5
CNKSR1Q969H4 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CNKSR1Q969H4 AL022322.2-201ENST00000624072 20397 ntBASIC5.66□□□□□ -1.5
CNKSR1Q969H4 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNKSR1Q969H4 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
CNKSR1Q969H4 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CNKSR1Q969H4 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.65□□□□□ -1.5
CNKSR1Q969H4 Y_RNA.29-201ENST00000362570 113 ntBASIC5.65□□□□□ -1.5
CNKSR1Q969H4 RNU6-212P-201ENST00000362642 104 ntBASIC5.65□□□□□ -1.5
CNKSR1Q969H4 Y_RNA.48-201ENST00000362710 103 ntBASIC5.65□□□□□ -1.5
CNKSR1Q969H4 RNY1P16-201ENST00000363063 111 ntBASIC5.65□□□□□ -1.5
CNKSR1Q969H4 Y_RNA.150-201ENST00000363562 102 ntBASIC5.65□□□□□ -1.5
CNKSR1Q969H4 RNU6-338P-201ENST00000383888 105 ntBASIC5.65□□□□□ -1.5
CNKSR1Q969H4 RNU6-746P-201ENST00000384112 109 ntBASIC5.65□□□□□ -1.5
CNKSR1Q969H4 MTCO3P19-201ENST00000415864 321 ntBASIC5.65□□□□□ -1.5
CNKSR1Q969H4 CYCSP43-201ENST00000438233 310 ntBASIC5.65□□□□□ -1.5
CNKSR1Q969H4 RPS3AP46-201ENST00000448352 682 ntBASIC5.65□□□□□ -1.5
CNKSR1Q969H4 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.65□□□□□ -1.5
CNKSR1Q969H4 AC026784.1-201ENST00000507986 352 ntBASIC5.65□□□□□ -1.5
CNKSR1Q969H4 AC069113.1-201ENST00000517763 267 ntBASIC5.65□□□□□ -1.5
CNKSR1Q969H4 AC103783.1-201ENST00000520506 373 ntBASIC5.65□□□□□ -1.5
CNKSR1Q969H4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.65□□□□□ -1.5
CNKSR1Q969H4 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.65□□□□□ -1.5
CNKSR1Q969H4 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC5.65□□□□□ -1.5
CNKSR1Q969H4 AC123786.2-201ENST00000603459 275 ntBASIC5.65□□□□□ -1.5
CNKSR1Q969H4 AC064801.1-201ENST00000612025 407 ntBASIC5.65□□□□□ -1.5
CNKSR1Q969H4 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.65□□□□□ -1.5
CNKSR1Q969H4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CNKSR1Q969H4 AC000374.1-201ENST00000434698 1745 ntBASIC5.65□□□□□ -1.51
CNKSR1Q969H4 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms