Protein–RNA interactions for Protein: Q16720

ATP2B3, Plasma membrane calcium-transporting ATPase 3, humanhuman

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B3Q16720 AL049714.1-201ENST00000466686 347 ntBASIC4.3□□□□□ -1.72
ATP2B3Q16720 RN7SL330P-201ENST00000469709 307 ntBASIC4.3□□□□□ -1.72
ATP2B3Q16720 ST13P14-201ENST00000474095 734 ntBASIC4.3□□□□□ -1.72
ATP2B3Q16720 RPL36AP51-201ENST00000487216 318 ntBASIC4.3□□□□□ -1.72
ATP2B3Q16720 AC091951.2-201ENST00000500762 203 ntBASIC4.3□□□□□ -1.72
ATP2B3Q16720 Vault.1-201ENST00000516474 102 ntBASIC4.3□□□□□ -1.72
ATP2B3Q16720 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC4.3□□□□□ -1.72
ATP2B3Q16720 AP000857.1-201ENST00000532151 543 ntBASIC4.3□□□□□ -1.72
ATP2B3Q16720 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC4.3□□□□□ -1.72
ATP2B3Q16720 ARL2BPP2-201ENST00000550907 489 ntBASIC4.3□□□□□ -1.72
ATP2B3Q16720 AL359212.1-201ENST00000556608 614 ntBASIC4.3□□□□□ -1.72
ATP2B3Q16720 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.3□□□□□ -1.72
ATP2B3Q16720 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC4.3□□□□□ -1.72
ATP2B3Q16720 AC007179.3-201ENST00000604976 235 ntBASIC4.3□□□□□ -1.72
ATP2B3Q16720 RNVU1-4-201ENST00000612985 164 ntBASIC4.3□□□□□ -1.72
ATP2B3Q16720 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC4.3□□□□□ -1.72
ATP2B3Q16720 AC104985.2-201ENST00000620598 500 ntBASIC4.3□□□□□ -1.72
ATP2B3Q16720 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC4.3□□□□□ -1.72
ATP2B3Q16720 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ATP2B3Q16720 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATP2B3Q16720 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
ATP2B3Q16720 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
ATP2B3Q16720 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.3□□□□□ -1.72
ATP2B3Q16720 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
ATP2B3Q16720 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATP2B3Q16720 XIAPP3-201ENST00000312918 795 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 RNU6-1120P-201ENST00000362988 108 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 RNU6-694P-201ENST00000364071 147 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 RNU1-33P-201ENST00000364249 162 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 Y_RNA.367-201ENST00000365544 101 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATP2B3Q16720 AL391417.1-201ENST00000404100 426 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.29□□□□□ -1.72
ATP2B3Q16720 ZNF90P2-204ENST00000419323 1075 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.29□□□□□ -1.72
ATP2B3Q16720 AC006512.1-201ENST00000468816 291 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 RN7SL594P-201ENST00000470590 287 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 AC083798.1-201ENST00000472671 131 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 AC135721.1-201ENST00000497954 479 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 RNU6-64P-201ENST00000517119 105 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 NDUFB9P3-201ENST00000521269 501 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 AP001646.1-201ENST00000527936 915 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 AC128657.1-201ENST00000549459 145 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 AC126177.3-201ENST00000551839 688 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.29□□□□□ -1.72
ATP2B3Q16720 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.29□□□□□ -1.72
ATP2B3Q16720 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.29□□□□□ -1.72
ATP2B3Q16720 AC063943.3-201ENST00000615562 356 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 AC104260.1-201ENST00000616660 539 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC4.29□□□□□ -1.72
ATP2B3Q16720 AC024940.5-201ENST00000622889 474 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATP2B3Q16720 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATP2B3Q16720 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATP2B3Q16720 AC073073.2-201ENST00000609827 2578 ntBASIC4.29□□□□□ -1.72
ATP2B3Q16720 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
ATP2B3Q16720 RNY3P3-201ENST00000363816 102 ntBASIC4.28□□□□□ -1.72
ATP2B3Q16720 RNU6-283P-201ENST00000364788 107 ntBASIC4.28□□□□□ -1.72
ATP2B3Q16720 RN7SKP285-201ENST00000410137 318 ntBASIC4.28□□□□□ -1.72
ATP2B3Q16720 RNU2-36P-201ENST00000410361 191 ntBASIC4.28□□□□□ -1.72
ATP2B3Q16720 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.28□□□□□ -1.72
ATP2B3Q16720 SSXP9-201ENST00000417503 292 ntBASIC4.28□□□□□ -1.72
ATP2B3Q16720 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC4.28□□□□□ -1.72
ATP2B3Q16720 AC093106.2-201ENST00000428212 385 ntBASIC4.28□□□□□ -1.72
ATP2B3Q16720 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.28□□□□□ -1.72
ATP2B3Q16720 USP12PX-201ENST00000432383 1057 ntBASIC4.28□□□□□ -1.72
ATP2B3Q16720 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC4.28□□□□□ -1.72
ATP2B3Q16720 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC4.28□□□□□ -1.72
ATP2B3Q16720 SNRPGP6-201ENST00000451124 220 ntBASIC4.28□□□□□ -1.72
ATP2B3Q16720 HSPD1P15-201ENST00000505573 1122 ntBASIC4.28□□□□□ -1.72
ATP2B3Q16720 AC023141.12-201ENST00000512399 199 ntBASIC4.28□□□□□ -1.72
ATP2B3Q16720 RNU6-410P-201ENST00000517006 107 ntBASIC4.28□□□□□ -1.72
ATP2B3Q16720 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC4.28□□□□□ -1.72
ATP2B3Q16720 OR4R1P-201ENST00000529879 463 ntBASIC4.28□□□□□ -1.72
ATP2B3Q16720 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC4.28□□□□□ -1.72
ATP2B3Q16720 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.28□□□□□ -1.72
ATP2B3Q16720 AP001029.3-201ENST00000588063 596 ntBASIC4.28□□□□□ -1.72
ATP2B3Q16720 AL031176.1-201ENST00000604554 466 ntBASIC4.28□□□□□ -1.72
ATP2B3Q16720 AC004908.2-201ENST00000609090 574 ntBASIC4.28□□□□□ -1.72
ATP2B3Q16720 AL354950.2-201ENST00000617939 290 ntBASIC4.28□□□□□ -1.72
ATP2B3Q16720 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
ATP2B3Q16720 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
ATP2B3Q16720 AL354685.2-201ENST00000448218 1447 ntBASIC4.28□□□□□ -1.72
ATP2B3Q16720 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATP2B3Q16720 AC073544.1-201ENST00000600110 1595 ntBASIC4.27□□□□□ -1.73
ATP2B3Q16720 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATP2B3Q16720 AL645937.1-201ENST00000641739 1652 ntBASIC4.27□□□□□ -1.73
ATP2B3Q16720 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
ATP2B3Q16720 RNU6-223P-201ENST00000362830 107 ntBASIC4.27□□□□□ -1.73
ATP2B3Q16720 Y_RNA.86-201ENST00000363020 111 ntBASIC4.27□□□□□ -1.73
ATP2B3Q16720 RNU6-1249P-201ENST00000363237 111 ntBASIC4.27□□□□□ -1.73
ATP2B3Q16720 Y_RNA.333-201ENST00000365274 102 ntBASIC4.27□□□□□ -1.73
ATP2B3Q16720 CRP-202ENST00000368110 667 ntTSL 3 BASIC4.27□□□□□ -1.73
ATP2B3Q16720 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
ATP2B3Q16720 Y_RNA.481-201ENST00000384373 102 ntBASIC4.27□□□□□ -1.73
ATP2B3Q16720 MIR135A2-201ENST00000384854 100 ntBASIC4.27□□□□□ -1.73
ATP2B3Q16720 PTMAP5-201ENST00000393073 333 ntBASIC4.27□□□□□ -1.73
ATP2B3Q16720 RNU6-516P-201ENST00000411381 104 ntBASIC4.27□□□□□ -1.73
ATP2B3Q16720 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
ATP2B3Q16720 USP9YP7-201ENST00000436723 430 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms