Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.46□□□□□ -1.54
VARSP26640 RN7SL544P-201ENST00000617232 284 ntBASIC5.46□□□□□ -1.54
VARSP26640 RN7SL763P-201ENST00000620922 284 ntBASIC5.46□□□□□ -1.54
VARSP26640 AL596275.2-206ENST00000641957 626 ntBASIC5.46□□□□□ -1.54
VARSP26640 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.46□□□□□ -1.54
VARSP26640 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
VARSP26640 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
VARSP26640 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
VARSP26640 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
VARSP26640 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VARSP26640 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.45□□□□□ -1.54
VARSP26640 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
VARSP26640 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VARSP26640 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
VARSP26640 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
VARSP26640 GVINP1-202ENST00000531871 7271 ntBASIC5.45□□□□□ -1.54
VARSP26640 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VARSP26640 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.45□□□□□ -1.54
VARSP26640 RNA5SP30-201ENST00000365552 115 ntBASIC5.45□□□□□ -1.54
VARSP26640 Y_RNA.586-201ENST00000391146 98 ntBASIC5.45□□□□□ -1.54
VARSP26640 CTSL3P-202ENST00000412179 788 ntBASIC5.45□□□□□ -1.54
VARSP26640 AL592148.1-201ENST00000413568 445 ntBASIC5.45□□□□□ -1.54
VARSP26640 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VARSP26640 TMEM183AP1-205ENST00000432739 290 ntBASIC5.45□□□□□ -1.54
VARSP26640 CFL1P1-202ENST00000432948 411 ntBASIC5.45□□□□□ -1.54
VARSP26640 Z82188.1-201ENST00000436709 154 ntBASIC5.45□□□□□ -1.54
VARSP26640 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.45□□□□□ -1.54
VARSP26640 KNOP1P3-201ENST00000446933 426 ntBASIC5.45□□□□□ -1.54
VARSP26640 SSXP4-201ENST00000451349 245 ntBASIC5.45□□□□□ -1.54
VARSP26640 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.45□□□□□ -1.54
VARSP26640 AC108161.1-201ENST00000461060 402 ntBASIC5.45□□□□□ -1.54
VARSP26640 RNU7-110P-201ENST00000516891 62 ntBASIC5.45□□□□□ -1.54
VARSP26640 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC5.45□□□□□ -1.54
VARSP26640 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.45□□□□□ -1.54
VARSP26640 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.45□□□□□ -1.54
VARSP26640 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC5.45□□□□□ -1.54
VARSP26640 AC023575.1-201ENST00000580510 358 ntBASIC5.45□□□□□ -1.54
VARSP26640 RPL7P50-201ENST00000600588 727 ntBASIC5.45□□□□□ -1.54
VARSP26640 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VARSP26640 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
VARSP26640 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VARSP26640 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VARSP26640 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
VARSP26640 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VARSP26640 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
VARSP26640 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
VARSP26640 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VARSP26640 OR4F13P-202ENST00000560066 2054 ntBASIC5.44□□□□□ -1.54
VARSP26640 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
VARSP26640 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
VARSP26640 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.44□□□□□ -1.54
VARSP26640 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC5.44□□□□□ -1.54
VARSP26640 AL731532.2-201ENST00000623542 1953 ntBASIC5.44□□□□□ -1.54
VARSP26640 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VARSP26640 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VARSP26640 RNA5SP52-201ENST00000362448 134 ntBASIC5.44□□□□□ -1.54
VARSP26640 RNU6-227P-201ENST00000362865 103 ntBASIC5.44□□□□□ -1.54
VARSP26640 Y_RNA.353-201ENST00000365440 108 ntBASIC5.44□□□□□ -1.54
VARSP26640 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VARSP26640 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.44□□□□□ -1.54
VARSP26640 RNU6-76P-201ENST00000384060 104 ntBASIC5.44□□□□□ -1.54
VARSP26640 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.44□□□□□ -1.54
VARSP26640 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.44□□□□□ -1.54
VARSP26640 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.44□□□□□ -1.54
VARSP26640 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.44□□□□□ -1.54
VARSP26640 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.44□□□□□ -1.54
VARSP26640 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VARSP26640 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC5.44□□□□□ -1.54
VARSP26640 IFNWP4-201ENST00000453148 294 ntBASIC5.44□□□□□ -1.54
VARSP26640 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.44□□□□□ -1.54
VARSP26640 AC091959.1-201ENST00000495857 238 ntBASIC5.44□□□□□ -1.54
VARSP26640 AC231760.1-201ENST00000498002 260 ntBASIC5.44□□□□□ -1.54
VARSP26640 AC006427.1-201ENST00000514359 712 ntBASIC5.44□□□□□ -1.54
VARSP26640 RNA5SP471-201ENST00000516971 106 ntBASIC5.44□□□□□ -1.54
VARSP26640 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.44□□□□□ -1.54
VARSP26640 AL049872.1-201ENST00000556323 322 ntBASIC5.44□□□□□ -1.54
VARSP26640 MIR3936-201ENST00000584304 110 ntBASIC5.44□□□□□ -1.54
VARSP26640 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.44□□□□□ -1.54
VARSP26640 AL161629.2-201ENST00000615347 275 ntBASIC5.44□□□□□ -1.54
VARSP26640 AC073349.3-201ENST00000617616 186 ntBASIC5.44□□□□□ -1.54
VARSP26640 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC5.44□□□□□ -1.54
VARSP26640 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.44□□□□□ -1.54
VARSP26640 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.44□□□□□ -1.54
VARSP26640 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VARSP26640 SRRM1P3-201ENST00000426911 2678 ntBASIC5.44□□□□□ -1.54
VARSP26640 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC5.44□□□□□ -1.54
VARSP26640 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VARSP26640 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.44□□□□□ -1.54
VARSP26640 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VARSP26640 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
VARSP26640 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VARSP26640 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
VARSP26640 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.44□□□□□ -1.54
VARSP26640 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.43□□□□□ -1.54
VARSP26640 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VARSP26640 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VARSP26640 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
VARSP26640 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
VARSP26640 UBE2WP1-201ENST00000362030 340 ntBASIC5.43□□□□□ -1.54
VARSP26640 RNA5SP443-201ENST00000363083 132 ntBASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms