Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC5.93□□□□□ -1.46
MS4A3Q96HJ5 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 TTI1-202ENST00000373448 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 RNU4-36P-201ENST00000364294 144 ntBASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 RN7SKP293-201ENST00000411389 296 ntBASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 RN7SL372P-201ENST00000461982 298 ntBASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 AC022730.1-201ENST00000473114 568 ntBASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 RPL36AP21-201ENST00000490372 323 ntBASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 AC087752.2-201ENST00000521219 281 ntBASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 AC027176.1-201ENST00000560204 514 ntBASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 AC136601.2-201ENST00000604356 474 ntBASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 SNX18P10-201ENST00000625014 519 ntBASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 SNORA16A-202ENST00000628458 135 ntBASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 AC093278.2-201ENST00000564956 2485 ntBASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 AC125257.1-201ENST00000560400 2930 ntBASIC5.92□□□□□ -1.46
MS4A3Q96HJ5 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 MAPK10-357ENST00000641831 2858 ntBASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 MIR541-201ENST00000401360 84 ntBASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 MIR1290-201ENST00000408735 78 ntBASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 TRBV29OR9-2-201ENST00000427589 333 ntBASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 AC079780.1-201ENST00000428259 207 ntBASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 AC012671.1-201ENST00000451912 203 ntBASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 PPIAP21-201ENST00000464473 501 ntBASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 RPL23AP67-201ENST00000465341 474 ntBASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 PPP1R11P1-201ENST00000486095 376 ntBASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 RNU1-117P-201ENST00000517041 158 ntBASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 AL591767.3-201ENST00000554632 525 ntBASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 MIR744-201ENST00000578242 98 ntBASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 FKBP1AP1-201ENST00000594588 318 ntBASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 AL590032.1-201ENST00000604920 252 ntBASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 AC132068.1-201ENST00000623805 459 ntBASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.91□□□□□ -1.46
MS4A3Q96HJ5 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 AC073136.1-201ENST00000449426 2884 ntBASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 TSPAN14-207ENST00000429989 16183 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 LDHAP5-201ENST00000394996 622 ntBASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 RN7SL382P-201ENST00000482631 282 ntBASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 RN7SL267P-201ENST00000485107 261 ntBASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 RN7SL350P-201ENST00000492591 299 ntBASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 AC011406.1-201ENST00000512440 370 ntBASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 AC093878.1-201ENST00000515630 432 ntBASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 RNU6-126P-201ENST00000516685 103 ntBASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 DEFB131E-201ENST00000532329 154 ntBASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 MIR3136-201ENST00000583498 78 ntBASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 uc_338.4-201ENST00000616635 176 ntBASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 AC112484.5-201ENST00000624189 228 ntBASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.46
MS4A3Q96HJ5 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
MS4A3Q96HJ5 SFTPD-AS1-201ENST00000608229 5001 ntBASIC5.9□□□□□ -1.47
MS4A3Q96HJ5 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
MS4A3Q96HJ5 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
MS4A3Q96HJ5 CHRM5-201ENST00000383263 5410 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.47
MS4A3Q96HJ5 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC5.9□□□□□ -1.47
MS4A3Q96HJ5 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
MS4A3Q96HJ5 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.9□□□□□ -1.47
MS4A3Q96HJ5 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
MS4A3Q96HJ5 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 100.2 ms