Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 RPL17P36-201ENST00000420302 549 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 OR2AM1P-201ENST00000422137 422 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 RPS29P10-201ENST00000439197 166 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 RPL26P6-201ENST00000440913 438 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 Z95327.1-201ENST00000446082 482 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 RPS11P1-201ENST00000451072 473 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 AC007395.1-201ENST00000451333 677 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 RNU6-1037P-201ENST00000459571 107 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 AC008481.1-201ENST00000463278 396 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 RN7SL189P-201ENST00000468631 289 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 RNA5SP392-201ENST00000516905 112 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 AC023824.2-201ENST00000566185 400 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 MIR3684-201ENST00000579779 74 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 AC006329.2-201ENST00000611491 394 ntBASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
NKX2-3Q8TAU0 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 Y_RNA.71-201ENST00000362892 104 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 Y_RNA.218-201ENST00000364218 104 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 HSPE1P8-201ENST00000406997 288 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 U3.35-201ENST00000408405 208 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 FTLP19-201ENST00000433300 394 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 AC073264.2-201ENST00000448886 166 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 AC090602.1-201ENST00000469695 252 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 AC005840.1-201ENST00000498412 377 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 SNORA70.11-201ENST00000515987 138 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 SNORA70.13-201ENST00000516116 138 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 RNU6-352P-201ENST00000516908 107 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 IGKV1-32-201ENST00000519290 311 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 AC134698.5-201ENST00000519444 336 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 CYCSP26-201ENST00000534107 320 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 AP006289.1-201ENST00000538089 277 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 LRRC37A5P-203ENST00000580181 585 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 AC010332.2-201ENST00000613083 1904 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 ZNF826P-207ENST00000622273 1910 ntBASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
NKX2-3Q8TAU0 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 MFSD8-216ENST00000641147 4009 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 Y_RNA.308-201ENST00000365043 101 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 RNU4-65P-201ENST00000410473 140 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 AC092809.3-201ENST00000415453 231 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 RPL21P90-201ENST00000415692 466 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 DDX39BP1-205ENST00000422507 192 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 RAB28P5-201ENST00000427490 651 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 AC010326.1-201ENST00000462726 602 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 RNY3P16-201ENST00000516338 101 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 SNORD116-25-201ENST00000516517 92 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 RN7SKP260-201ENST00000516907 149 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 CASP1P1-201ENST00000526345 212 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 FKBP1BP1-201ENST00000553366 325 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 MIR4659A-201ENST00000580269 81 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 AC105254.2-201ENST00000603636 436 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 Y_RNA.802-201ENST00000614892 130 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 MIR6758-201ENST00000620653 63 ntBASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
NKX2-3Q8TAU0 USP8-204ENST00000425032 3559 ntTSL 2 BASIC6.04□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms