Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.96□□□□□ -1.78
VRK3Q8IV63 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.96□□□□□ -1.78
VRK3Q8IV63 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
VRK3Q8IV63 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.96□□□□□ -1.78
VRK3Q8IV63 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.96□□□□□ -1.78
VRK3Q8IV63 AL355598.1-201ENST00000604169 202 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 AC113194.1-201ENST00000606037 500 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 AC090425.1-201ENST00000610007 140 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 AC123768.4-201ENST00000616244 701 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC3.96□□□□□ -1.78
VRK3Q8IV63 AL773545.4-201ENST00000637262 310 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 AL513478.4-201ENST00000641636 310 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
VRK3Q8IV63 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.96□□□□□ -1.78
VRK3Q8IV63 AC010300.1-201ENST00000600671 5134 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 MTND5P19-201ENST00000424872 1794 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
VRK3Q8IV63 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.96□□□□□ -1.78
VRK3Q8IV63 AL356489.2-201ENST00000566968 3528 ntBASIC3.96□□□□□ -1.78
VRK3Q8IV63 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
VRK3Q8IV63 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.95□□□□□ -1.78
VRK3Q8IV63 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VRK3Q8IV63 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
VRK3Q8IV63 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC3.95□□□□□ -1.78
VRK3Q8IV63 MIR372-201ENST00000362225 67 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 RNA5SP391-201ENST00000363456 119 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 RNU6-1032P-201ENST00000384100 107 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 RNU1-13P-201ENST00000384499 162 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 CISD1P1-201ENST00000393907 327 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 AL360182.1-201ENST00000397433 468 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 UBE2V1P2-201ENST00000397758 440 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 RNU2-21P-201ENST00000410368 188 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.95□□□□□ -1.78
VRK3Q8IV63 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.95□□□□□ -1.78
VRK3Q8IV63 RPL21P23-201ENST00000446654 460 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 RNU7-59P-201ENST00000459101 61 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC3.95□□□□□ -1.78
VRK3Q8IV63 AC106872.2-201ENST00000494303 480 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 HMGB1P21-201ENST00000502313 581 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.95□□□□□ -1.78
VRK3Q8IV63 RNU6-256P-201ENST00000516747 97 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.95□□□□□ -1.78
VRK3Q8IV63 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.95□□□□□ -1.78
VRK3Q8IV63 MIR4790-201ENST00000577799 79 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 AC023043.2-201ENST00000589678 1026 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.95□□□□□ -1.78
VRK3Q8IV63 AC104662.1-201ENST00000604448 511 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 MIR6864-201ENST00000617935 70 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 AC022418.1-201ENST00000624118 445 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.95□□□□□ -1.78
VRK3Q8IV63 AC119674.1-207ENST00000641355 633 ntBASIC3.95□□□□□ -1.78
VRK3Q8IV63 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.95□□□□□ -1.78
VRK3Q8IV63 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
VRK3Q8IV63 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VRK3Q8IV63 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VRK3Q8IV63 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VRK3Q8IV63 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
VRK3Q8IV63 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
VRK3Q8IV63 BDP1P-201ENST00000582658 1990 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
VRK3Q8IV63 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VRK3Q8IV63 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
VRK3Q8IV63 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 SNORA60-201ENST00000362396 134 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 RNU6-1115P-201ENST00000362490 106 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 RNU6-179P-201ENST00000363350 107 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 Y_RNA.135-201ENST00000363439 95 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 RNU5E-6P-201ENST00000365574 115 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 RNU6-641P-201ENST00000384006 107 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 RNU6-278P-201ENST00000390945 109 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 RPL21P65-201ENST00000406094 466 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 RNU4-6P-201ENST00000410804 122 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 TRAPPC2P5-201ENST00000426293 308 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 AL162388.1-201ENST00000450912 352 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 AL354710.1-201ENST00000453641 246 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 BTF3P15-201ENST00000455606 336 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 snoU13.7-201ENST00000459220 104 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 RPL30P11-201ENST00000495304 339 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 AC022968.1-201ENST00000567372 442 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 AC136624.4-201ENST00000573044 370 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 MIR5583-1-201ENST00000580941 59 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.94□□□□□ -1.78
VRK3Q8IV63 AC025946.2-201ENST00000603398 234 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 AC023043.4-201ENST00000612081 449 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 AC083806.3-201ENST00000614016 455 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 AL157817.1-201ENST00000614264 790 ntBASIC3.94□□□□□ -1.78
VRK3Q8IV63 U4.1-201ENST00000620349 87 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 227 ms