Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 AC080013.2-201ENST00000460866 323 ntBASIC7.14□□□□□ -1.27
RNF39Q9H2S5 RN7SL561P-201ENST00000488553 281 ntBASIC7.14□□□□□ -1.27
RNF39Q9H2S5 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 IGKV2OR2-1-201ENST00000605129 304 ntBASIC7.14□□□□□ -1.27
RNF39Q9H2S5 MIR6721-201ENST00000617181 87 ntBASIC7.14□□□□□ -1.27
RNF39Q9H2S5 AC004925.1-201ENST00000624256 2706 ntBASIC7.14□□□□□ -1.27
RNF39Q9H2S5 AC064859.1-201ENST00000624741 174 ntBASIC7.14□□□□□ -1.27
RNF39Q9H2S5 CCT7-217ENST00000626868 249 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 AC010325.3-201ENST00000641084 394 ntBASIC7.14□□□□□ -1.27
RNF39Q9H2S5 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.14□□□□□ -1.27
RNF39Q9H2S5 SPARCL1-205ENST00000503414 2520 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 AC127070.3-201ENST00000503695 3263 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 ZNF292-202ENST00000369577 10610 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 ABLIM3-201ENST00000309868 4326 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 UBAP2L-203ENST00000361546 3864 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 SNORD115-19-201ENST00000363098 82 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 SNORD115-18-201ENST00000363293 82 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 RNU6-271P-201ENST00000363858 105 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 SNORD115-17-201ENST00000364612 82 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 RNU6-1307P-201ENST00000391012 103 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 AC000111.2-201ENST00000448200 210 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 AL390728.3-201ENST00000452704 270 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 AC118758.1-202ENST00000454719 225 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 SNORA31.23-201ENST00000517219 133 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 AL133399.1-201ENST00000527476 298 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 AC007494.1-201ENST00000562293 760 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 RN7SL199P-201ENST00000578752 281 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 RN7SL656P-201ENST00000579044 281 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 RN7SL404P-201ENST00000582421 281 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 AC108738.1-201ENST00000603703 237 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 Y_RNA.773-201ENST00000607168 90 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 AC091979.2-201ENST00000607514 214 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 RNU6-91P-201ENST00000607774 107 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 IGKV2OR2-10-201ENST00000613976 311 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 AC006133.1-201ENST00000617106 264 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 AL591926.1-201ENST00000620542 217 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 AC023245.2-201ENST00000530760 2978 ntBASIC7.13□□□□□ -1.27
RNF39Q9H2S5 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
RNF39Q9H2S5 AP000547.3-204ENST00000588548 2523 ntBASIC7.12□□□□□ -1.27
RNF39Q9H2S5 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.12□□□□□ -1.27
RNF39Q9H2S5 TRIM5-203ENST00000396847 3170 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF39Q9H2S5 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF39Q9H2S5 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF39Q9H2S5 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF39Q9H2S5 ENAH-209ENST00000635051 3308 ntAPPRIS ALT2 TSL 5 BASIC7.12□□□□□ -1.27
RNF39Q9H2S5 SNORD24-201ENST00000383884 75 ntBASIC7.12□□□□□ -1.27
RNF39Q9H2S5 RNU6-837P-201ENST00000391056 108 ntBASIC7.12□□□□□ -1.27
RNF39Q9H2S5 AL355796.1-201ENST00000406706 323 ntBASIC7.12□□□□□ -1.27
RNF39Q9H2S5 AL359092.1-201ENST00000417156 265 ntBASIC7.12□□□□□ -1.27
RNF39Q9H2S5 GAPDHP59-201ENST00000435908 267 ntBASIC7.12□□□□□ -1.27
RNF39Q9H2S5 AL353813.1-201ENST00000440700 253 ntBASIC7.12□□□□□ -1.27
RNF39Q9H2S5 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC7.12□□□□□ -1.27
RNF39Q9H2S5 AURKAPS2-201ENST00000454983 333 ntBASIC7.12□□□□□ -1.27
RNF39Q9H2S5 AC108022.1-201ENST00000493466 478 ntBASIC7.12□□□□□ -1.27
RNF39Q9H2S5 SNORA74.1-201ENST00000516320 180 ntBASIC7.12□□□□□ -1.27
RNF39Q9H2S5 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC7.12□□□□□ -1.27
RNF39Q9H2S5 MIR3154-201ENST00000577829 84 ntBASIC7.12□□□□□ -1.27
RNF39Q9H2S5 MIR3923-201ENST00000579521 83 ntBASIC7.12□□□□□ -1.27
RNF39Q9H2S5 MIR7109-201ENST00000613748 65 ntBASIC7.12□□□□□ -1.27
RNF39Q9H2S5 U1.41-201ENST00000617626 165 ntBASIC7.12□□□□□ -1.27
RNF39Q9H2S5 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC7.12□□□□□ -1.27
RNF39Q9H2S5 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF39Q9H2S5 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
RNF39Q9H2S5 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
RNF39Q9H2S5 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 GRAMD1B-207ENST00000529750 7723 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 OR2G6-203ENST00000641804 6084 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 DPY19L3-202ENST00000392250 5998 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 UBE3AP2-201ENST00000429033 2259 ntBASIC7.11□□□□□ -1.27
RNF39Q9H2S5 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
RNF39Q9H2S5 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms