Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC3.29□□□□□ -1.88
NKX2-2O95096 AC079781.2-201ENST00000446424 169 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-2O95096 AC132479.1-201ENST00000449160 144 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 SSXP4-201ENST00000451349 245 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 MTCYBP1-201ENST00000454315 1119 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 RNA5SP310-201ENST00000459084 116 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 RPS3AP17-201ENST00000472594 777 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-2O95096 RPL37P25-201ENST00000507308 276 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 AC108078.1-201ENST00000508073 725 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 RN7SKP18-201ENST00000516005 275 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 SNORA70.14-201ENST00000516205 110 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 RNU6-445P-201ENST00000516949 107 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 RNU6-410P-201ENST00000517006 107 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
NKX2-2O95096 ATP5F1P5-201ENST00000526403 760 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.29□□□□□ -1.88
NKX2-2O95096 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC3.29□□□□□ -1.88
NKX2-2O95096 AC026333.2-201ENST00000542164 106 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-2O95096 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-2O95096 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-2O95096 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.29□□□□□ -1.88
NKX2-2O95096 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-2O95096 DPPA3P3-201ENST00000603842 430 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.29□□□□□ -1.88
NKX2-2O95096 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-2O95096 AL359740.1-201ENST00000624340 592 ntBASIC3.29□□□□□ -1.88
NKX2-2O95096 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.29□□□□□ -1.88
NKX2-2O95096 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
NKX2-2O95096 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX2-2O95096 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-2O95096 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
NKX2-2O95096 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
NKX2-2O95096 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC3.28□□□□□ -1.88
NKX2-2O95096 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NKX2-2O95096 SLC30A6-203ENST00000379343 2354 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NKX2-2O95096 RNA5SP124-201ENST00000362739 110 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 RNU6-1097P-201ENST00000363586 107 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 RNU6-14P-201ENST00000384630 106 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 SNORA1.3-201ENST00000384676 136 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 GSTA9P-201ENST00000406231 611 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 FAT1P1-201ENST00000406588 507 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 RNU6ATAC-201ENST00000408749 126 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 MIR1183-201ENST00000408856 89 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC3.28□□□□□ -1.88
NKX2-2O95096 MTCO2P11-201ENST00000431069 680 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 SNRPEP4-201ENST00000435815 279 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX2-2O95096 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX2-2O95096 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.28□□□□□ -1.88
NKX2-2O95096 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
NKX2-2O95096 AC078785.3-201ENST00000476607 425 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX2-2O95096 HMGB1P29-201ENST00000505659 499 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX2-2O95096 AC026784.1-201ENST00000507986 352 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.28□□□□□ -1.88
NKX2-2O95096 RNU1-95P-201ENST00000516357 160 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 RNU6-720P-201ENST00000516363 108 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 SNORA70.18-201ENST00000516696 98 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 RNU1-128P-201ENST00000516704 160 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.28□□□□□ -1.88
NKX2-2O95096 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX2-2O95096 TRAV28-201ENST00000557548 323 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX2-2O95096 AC010591.1-201ENST00000603941 649 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 AC007619.2-201ENST00000605743 379 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 AC012557.2-201ENST00000605919 418 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 AC034102.8-201ENST00000615146 484 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 AC002076.2-201ENST00000617362 122 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NKX2-2O95096 AC022149.2-201ENST00000621061 203 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 AC007998.5-201ENST00000622938 237 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 AC027309.3-201ENST00000623419 351 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.28□□□□□ -1.88
NKX2-2O95096 MTND1P37-201ENST00000636562 264 ntBASIC3.28□□□□□ -1.88
NKX2-2O95096 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.28□□□□□ -1.88
NKX2-2O95096 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.28□□□□□ -1.88
NKX2-2O95096 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NKX2-2O95096 ZNF285B-201ENST00000561698 1767 ntBASIC3.28□□□□□ -1.89
NKX2-2O95096 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NKX2-2O95096 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
NKX2-2O95096 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
NKX2-2O95096 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.27□□□□□ -1.89
NKX2-2O95096 RNU6-188P-201ENST00000364207 107 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 RN7SKP226-201ENST00000364912 300 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 RNU6-817P-201ENST00000391083 104 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 RPS4XP3-201ENST00000398541 413 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 AL136116.1-201ENST00000403591 381 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 AL139397.2-201ENST00000404529 772 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.27□□□□□ -1.89
NKX2-2O95096 RAB9AP3-201ENST00000412737 573 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 AMD1P2-201ENST00000412936 992 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.27□□□□□ -1.89
NKX2-2O95096 AC068533.1-201ENST00000418542 415 ntBASIC3.27□□□□□ -1.89
NKX2-2O95096 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC3.27□□□□□ -1.89
NKX2-2O95096 CYCSP4-201ENST00000429682 331 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms