Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC015795.1-201ENST00000513669 327 ntBASIC6□□□□□ -1.45
ZC3H4Q9UPT8 RNU7-4P-201ENST00000516961 62 ntBASIC6□□□□□ -1.45
ZC3H4Q9UPT8 AC090151.1-201ENST00000520784 730 ntBASIC6□□□□□ -1.45
ZC3H4Q9UPT8 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6□□□□□ -1.45
ZC3H4Q9UPT8 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC6□□□□□ -1.45
ZC3H4Q9UPT8 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6□□□□□ -1.45
ZC3H4Q9UPT8 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
ZC3H4Q9UPT8 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC6□□□□□ -1.45
ZC3H4Q9UPT8 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ZC3H4Q9UPT8 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZC3H4Q9UPT8 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ZC3H4Q9UPT8 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
ZC3H4Q9UPT8 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6□□□□□ -1.45
ZC3H4Q9UPT8 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6□□□□□ -1.45
ZC3H4Q9UPT8 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
ZC3H4Q9UPT8 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 Y_RNA.526-201ENST00000384572 110 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 SNORA19-201ENST00000384737 128 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 RNU6-821P-201ENST00000390995 107 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 AL445529.1-201ENST00000398713 389 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 AC110754.1-201ENST00000399740 601 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 AL590704.1-201ENST00000402856 794 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 AL138885.1-201ENST00000405921 675 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 RNA5SP44-201ENST00000410446 133 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 RPEP3-201ENST00000425462 676 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 RPS17P8-201ENST00000434525 335 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 RPL23AP56-201ENST00000460778 453 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 AC012158.1-204ENST00000483430 465 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 AC093852.1-201ENST00000503587 266 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 HIGD1AP3-201ENST00000515857 278 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 RNU6-182P-201ENST00000516970 105 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 AF186190.1-201ENST00000517470 480 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 IGKV2-23-201ENST00000518729 323 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 CBX3P8-201ENST00000532412 525 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 AC090517.1-201ENST00000569307 266 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 AL355812.1-201ENST00000603215 216 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 ZYXP1-201ENST00000617638 118 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 ADAM5-202ENST00000399789 1942 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 RNU6-770P-201ENST00000363929 105 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 RNU6-200P-201ENST00000364743 107 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 Y_RNA.562-201ENST00000384695 113 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 RNU6-1093P-201ENST00000391194 107 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 HSPE1P8-201ENST00000406997 288 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 RPL21P90-201ENST00000415692 466 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 AC139712.2-201ENST00000424302 339 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 LAMTOR3P1-201ENST00000428620 370 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 AC130454.1-201ENST00000622948 401 ntBASIC5.99□□□□□ -1.45
ZC3H4Q9UPT8 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 AL157777.2-201ENST00000258070 137 ntBASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 RNY1P16-201ENST00000363063 111 ntBASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 SNORD27-201ENST00000363981 72 ntBASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 RNU4-50P-201ENST00000364361 141 ntBASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 SNORA2.3-201ENST00000383920 135 ntBASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 MIR625-201ENST00000385047 85 ntBASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 NDUFB4P8-201ENST00000435351 367 ntBASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 RNU6-953P-201ENST00000459154 107 ntBASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 RPL31P60-201ENST00000478450 367 ntBASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 AC098976.1-201ENST00000513014 541 ntBASIC5.98□□□□□ -1.45
ZC3H4Q9UPT8 ACA59.1-201ENST00000515966 143 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms