Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 SRIP1-201ENST00000489235 288 ntBASIC7.8□□□□□ -1.16
RNF216Q9NWF9 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 AL161420.1-201ENST00000619393 264 ntBASIC7.8□□□□□ -1.16
RNF216Q9NWF9 AC018692.3-201ENST00000623929 123 ntBASIC7.8□□□□□ -1.16
RNF216Q9NWF9 TEX41-293ENST00000630451 690 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 VPS53-204ENST00000437048 13106 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 AC005725.1-201ENST00000577346 2607 ntBASIC7.8□□□□□ -1.16
RNF216Q9NWF9 MEF2C-254ENST00000637732 3347 ntTSL 5 BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC7.8□□□□□ -1.16
RNF216Q9NWF9 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF216Q9NWF9 RGPD1-201ENST00000398193 5425 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF216Q9NWF9 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
RNF216Q9NWF9 BIN2P1-201ENST00000504996 1530 ntBASIC7.79□□□□□ -1.16
RNF216Q9NWF9 OLMALINC-203ENST00000641087 3779 ntBASIC7.79□□□□□ -1.16
RNF216Q9NWF9 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.79□□□□□ -1.16
RNF216Q9NWF9 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.79□□□□□ -1.16
RNF216Q9NWF9 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF216Q9NWF9 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF216Q9NWF9 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF216Q9NWF9 Y_RNA.290-201ENST00000364879 114 ntBASIC7.79□□□□□ -1.16
RNF216Q9NWF9 MIR759-201ENST00000390224 91 ntBASIC7.79□□□□□ -1.16
RNF216Q9NWF9 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC7.79□□□□□ -1.16
RNF216Q9NWF9 EI24P2-201ENST00000397776 1076 ntBASIC7.79□□□□□ -1.16
RNF216Q9NWF9 RNA5SP504-201ENST00000410676 117 ntBASIC7.79□□□□□ -1.16
RNF216Q9NWF9 RPL23AP1-201ENST00000428990 471 ntBASIC7.79□□□□□ -1.16
RNF216Q9NWF9 AC064862.5-201ENST00000440618 334 ntBASIC7.79□□□□□ -1.16
RNF216Q9NWF9 AC023449.1-201ENST00000454464 154 ntBASIC7.79□□□□□ -1.16
RNF216Q9NWF9 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC7.79□□□□□ -1.16
RNF216Q9NWF9 RNA5SP236-201ENST00000516169 116 ntBASIC7.79□□□□□ -1.16
RNF216Q9NWF9 RNU6-1337P-201ENST00000516525 95 ntBASIC7.79□□□□□ -1.16
RNF216Q9NWF9 RNU6-1018P-201ENST00000516577 106 ntBASIC7.79□□□□□ -1.16
RNF216Q9NWF9 MIR3923-201ENST00000579521 83 ntBASIC7.79□□□□□ -1.16
RNF216Q9NWF9 AL020997.2-201ENST00000602607 184 ntBASIC7.79□□□□□ -1.16
RNF216Q9NWF9 AL591034.3-201ENST00000605511 685 ntBASIC7.79□□□□□ -1.16
RNF216Q9NWF9 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC7.79□□□□□ -1.16
RNF216Q9NWF9 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC7.79□□□□□ -1.16
RNF216Q9NWF9 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
RNF216Q9NWF9 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF216Q9NWF9 AL591848.4-201ENST00000567832 3472 ntBASIC7.79□□□□□ -1.16
RNF216Q9NWF9 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF216Q9NWF9 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
RNF216Q9NWF9 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 Y_RNA.213-201ENST00000364178 111 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 Y_RNA.265-201ENST00000364677 108 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 SNORD116-13-201ENST00000384408 92 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 AL033519.1-201ENST00000407266 307 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 MIR1204-201ENST00000408388 67 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 AC004866.1-201ENST00000411748 78 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 AC099548.1-201ENST00000421443 426 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 FTLP17-201ENST00000432567 525 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 MYL6P3-201ENST00000436904 432 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 H2AFZP5-201ENST00000446960 382 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 GAPDHP53-201ENST00000458397 924 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 RPS26P11-201ENST00000463445 348 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 RPS26P6-201ENST00000475156 348 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 AC114324.2-202ENST00000503812 134 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 RN7SKP233-201ENST00000517005 110 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 MED28P6-201ENST00000558776 231 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 MIR4666B-201ENST00000578142 81 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 AC138207.8-204ENST00000579588 527 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 RN7SL66P-201ENST00000582099 264 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 MIR6780B-201ENST00000610307 79 ntBASIC7.78□□□□□ -1.16
RNF216Q9NWF9 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 LRRC31-201ENST00000264676 2355 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
RNF216Q9NWF9 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC7.77□□□□□ -1.17
RNF216Q9NWF9 RRS1-AS1-201ENST00000499642 4366 ntTSL 2 BASIC7.77□□□□□ -1.17
RNF216Q9NWF9 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF216Q9NWF9 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
RNF216Q9NWF9 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.77□□□□□ -1.17
RNF216Q9NWF9 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms