Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
HERC6Q8IVU3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HERC6Q8IVU3 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AC090740.1-201ENST00000623193 2262 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 RNU6-623P-201ENST00000363143 105 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 RNY4P16-201ENST00000364768 94 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.81□□□□□ -1.8
HERC6Q8IVU3 HMGB3P20-201ENST00000417997 600 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AL589823.1-201ENST00000429577 183 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 ARPC3P1-201ENST00000437218 533 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AC005094.1-201ENST00000440420 368 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 TXNP1-201ENST00000441872 371 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 USP9YP15-201ENST00000442391 422 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 RPS20P20-201ENST00000460498 340 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 S100A11P2-201ENST00000467589 312 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
HERC6Q8IVU3 RPS27AP1-201ENST00000475545 471 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AC020893.1-201ENST00000502452 580 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AC010587.1-201ENST00000505809 469 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC3.81□□□□□ -1.8
HERC6Q8IVU3 RNU2-10P-201ENST00000516375 211 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 RNU6-64P-201ENST00000517119 105 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 IGKV2-26-201ENST00000518305 343 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AC107934.1-201ENST00000522215 217 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 FAM60DP-201ENST00000524174 632 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AP003181.2-201ENST00000528941 181 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AC090578.1-201ENST00000604955 591 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AC010133.1-201ENST00000615809 842 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AC072046.2-201ENST00000618366 268 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AC092656.1-203ENST00000624134 423 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AC110994.2-201ENST00000635481 492 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 AC099654.13-201ENST00000639774 207 ntBASIC3.81□□□□□ -1.8
HERC6Q8IVU3 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
HERC6Q8IVU3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.81□□□□□ -1.8
HERC6Q8IVU3 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 RNU6-1284P-201ENST00000363701 100 ntBASIC3.8□□□□□ -1.8
HERC6Q8IVU3 RNU4-24P-201ENST00000364565 139 ntBASIC3.8□□□□□ -1.8
HERC6Q8IVU3 SNORA36C-201ENST00000384289 132 ntBASIC3.8□□□□□ -1.8
HERC6Q8IVU3 RPL23AP32-201ENST00000395315 459 ntBASIC3.8□□□□□ -1.8
HERC6Q8IVU3 RN7SKP53-201ENST00000411337 315 ntBASIC3.8□□□□□ -1.8
HERC6Q8IVU3 CDK8P2-201ENST00000415020 547 ntBASIC3.8□□□□□ -1.8
HERC6Q8IVU3 AL589872.1-201ENST00000426602 288 ntBASIC3.8□□□□□ -1.8
HERC6Q8IVU3 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 AL353706.1-201ENST00000436728 494 ntBASIC3.8□□□□□ -1.8
HERC6Q8IVU3 AC006028.1-201ENST00000438379 402 ntBASIC3.8□□□□□ -1.8
HERC6Q8IVU3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 AL136380.1-201ENST00000447970 162 ntBASIC3.8□□□□□ -1.8
HERC6Q8IVU3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 MTCO3P20-201ENST00000454926 688 ntBASIC3.8□□□□□ -1.8
HERC6Q8IVU3 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 SNORA70.16-201ENST00000516390 95 ntBASIC3.8□□□□□ -1.8
HERC6Q8IVU3 SYF2P1-201ENST00000550658 413 ntBASIC3.8□□□□□ -1.8
HERC6Q8IVU3 MIR5004-201ENST00000579078 107 ntBASIC3.8□□□□□ -1.8
HERC6Q8IVU3 AC103987.3-201ENST00000582071 292 ntBASIC3.8□□□□□ -1.8
HERC6Q8IVU3 MIR3124-201ENST00000582636 67 ntBASIC3.8□□□□□ -1.8
HERC6Q8IVU3 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
HERC6Q8IVU3 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AC002546.1-201ENST00000588041 2504 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 OR1S2-201ENST00000302592 978 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AL663109.1-201ENST00000411498 844 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 AC127391.1-201ENST00000411737 98 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 HMGB3P23-201ENST00000414981 585 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.79□□□□□ -1.8
HERC6Q8IVU3 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms