Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 A1CF-201ENST00000282641 9350 ntAPPRIS ALT1 TSL 2 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 NLRP3-202ENST00000348069 3828 ntTSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 DCAF1-203ENST00000504652 5951 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 CD109-202ENST00000422508 9221 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 BRD8-202ENST00000254900 4388 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 ODF2-209ENST00000434106 3890 ntTSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 DDAH1-202ENST00000426972 4017 ntTSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 SNORA1.2-201ENST00000365189 134 ntBASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 RN7SKP208-201ENST00000365474 361 ntBASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 Y_RNA.379-201ENST00000365653 102 ntBASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 RNA5SP482-201ENST00000391269 118 ntBASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 RNU2-7P-201ENST00000410794 178 ntBASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 RNU6-1086P-201ENST00000410930 100 ntBASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 CSE1L-AS1-201ENST00000417781 556 ntTSL 2 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 HMGN2P18-201ENST00000450680 270 ntBASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 HSPE1P24-201ENST00000450782 238 ntBASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 RN7SL291P-201ENST00000487916 289 ntBASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 TP53TG3HP-201ENST00000563487 346 ntBASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 AC126773.1-201ENST00000569654 547 ntTSL 4 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 RN7SL140P-201ENST00000581321 294 ntBASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 ELOF1-207ENST00000591674 679 ntTSL 2 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 RHOXF1P2-201ENST00000635431 502 ntBASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 AC019270.1-201ENST00000523495 3488 ntTSL 5 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 ZNF407-207ENST00000582337 5662 ntTSL 5 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 LPIN1-207ENST00000425416 5582 ntTSL 2 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 ZNF708-201ENST00000356929 4004 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 GRIN2A-205ENST00000535259 4118 ntTSL 5 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 PCDH19-203ENST00000420881 7936 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 SRGAP2-203ENST00000573034 6301 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 PAICS-207ENST00000512576 6480 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-3Q9BYR6 CELF2-209ENST00000631460 5538 ntTSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 AC007126.1-201ENST00000508202 4781 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 AC025031.4-201ENST00000621248 3271 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 STAMBP-202ENST00000394070 6691 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 RPL7L1-208ENST00000493763 4476 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 OR9M1P-202ENST00000641564 3163 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 AFAP1-AS1-201ENST00000608442 6795 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 ZNF827-203ENST00000508784 7463 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 IKZF3-217ENST00000623724 9787 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 SNORD45.1-201ENST00000363181 77 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 SNORD113.1-201ENST00000363280 73 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 RNU6-340P-201ENST00000364005 107 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 RNU6-132P-201ENST00000383863 107 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 RNA5SP467-201ENST00000391274 118 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 PTMAP2-201ENST00000397627 327 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 MIR1296-201ENST00000408136 92 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 POLR1B-204ENST00000417433 3836 ntTSL 2 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 RNU7-67P-201ENST00000459003 62 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 RN7SL841P-201ENST00000470547 297 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 RPS29P11-201ENST00000496507 171 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 RNU7-79P-201ENST00000516082 62 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 AP003119.2-201ENST00000528075 336 ntTSL 3 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 AC011840.3-201ENST00000579378 280 ntTSL 3 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 AC005498.2-201ENST00000590579 326 ntTSL 2 BASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 AC004840.2-201ENST00000603368 285 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 AL020996.3-201ENST00000606617 222 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 MIR6505-201ENST00000617206 71 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 Metazoa_SRP.27-201ENST00000617573 258 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 CTSLP2-204ENST00000629029 392 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 FAM238A-202ENST00000637359 442 ntBASIC3.99□□□□□ -1.77
KRTAP3-3Q9BYR6 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms