Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 RNA5SP30-201ENST00000365552 115 ntBASIC5.5□□□□□ -1.53
GFRA3O60609 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 RNU6-637P-201ENST00000384050 107 ntBASIC5.5□□□□□ -1.53
GFRA3O60609 RNU6-843P-201ENST00000384454 104 ntBASIC5.5□□□□□ -1.53
GFRA3O60609 RNY1P7-201ENST00000384743 110 ntBASIC5.5□□□□□ -1.53
GFRA3O60609 AC138761.5-201ENST00000433967 325 ntBASIC5.5□□□□□ -1.53
GFRA3O60609 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC5.5□□□□□ -1.53
GFRA3O60609 snoU13.30-201ENST00000458951 104 ntBASIC5.5□□□□□ -1.53
GFRA3O60609 RN7SL352P-201ENST00000466002 277 ntBASIC5.5□□□□□ -1.53
GFRA3O60609 SNORA58-201ENST00000505219 137 ntBASIC5.5□□□□□ -1.53
GFRA3O60609 RNU6-966P-201ENST00000516479 104 ntBASIC5.5□□□□□ -1.53
GFRA3O60609 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC5.5□□□□□ -1.53
GFRA3O60609 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC5.5□□□□□ -1.53
GFRA3O60609 MIR4301-201ENST00000577203 66 ntBASIC5.5□□□□□ -1.53
GFRA3O60609 MIR4675-201ENST00000577898 77 ntBASIC5.5□□□□□ -1.53
GFRA3O60609 AC010928.2-201ENST00000588017 287 ntBASIC5.5□□□□□ -1.53
GFRA3O60609 CYP4F35P-202ENST00000636121 390 ntBASIC5.5□□□□□ -1.53
GFRA3O60609 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.5□□□□□ -1.53
GFRA3O60609 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC5.5□□□□□ -1.53
GFRA3O60609 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.5□□□□□ -1.53
GFRA3O60609 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 C2CD5-202ENST00000396028 3463 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 C2CD5-203ENST00000446597 3490 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 C2CD5-206ENST00000536386 3496 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 NCOR1-201ENST00000268712 10720 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
GFRA3O60609 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC5.5□□□□□ -1.53
GFRA3O60609 AC134026.1-201ENST00000623249 2239 ntBASIC5.5□□□□□ -1.53
GFRA3O60609 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA3O60609 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA3O60609 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA3O60609 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.49□□□□□ -1.53
GFRA3O60609 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC5.49□□□□□ -1.53
GFRA3O60609 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA3O60609 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA3O60609 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA3O60609 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA3O60609 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC5.49□□□□□ -1.53
GFRA3O60609 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
GFRA3O60609 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA3O60609 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.49□□□□□ -1.53
GFRA3O60609 Y_RNA.123-201ENST00000363338 102 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 RNU6-827P-201ENST00000365553 106 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA3O60609 AL359837.1-201ENST00000381357 287 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 Y_RNA.466-201ENST00000384294 113 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 MIR551A-201ENST00000385042 96 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 BCL2L11-207ENST00000405953 425 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA3O60609 AL714022.1-201ENST00000439897 151 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.49□□□□□ -1.53
GFRA3O60609 SDC4P-201ENST00000453285 601 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 RN7SL41P-201ENST00000476144 297 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 RNU1-86P-201ENST00000516108 154 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 SNORA40.13-201ENST00000516379 120 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 RNU6-1061P-201ENST00000516530 99 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 RNU1-107P-201ENST00000516617 154 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.49□□□□□ -1.53
GFRA3O60609 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC5.49□□□□□ -1.53
GFRA3O60609 SNORD39.2-201ENST00000579995 76 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC5.49□□□□□ -1.53
GFRA3O60609 AC060766.3-201ENST00000591442 263 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 CDC42EP3P1-201ENST00000601004 764 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 AC022441.3-201ENST00000605737 136 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 TUG1_2.1-201ENST00000614234 87 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 AC024255.1-201ENST00000614376 102 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 AC068831.7-201ENST00000616954 363 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 uc_338.9-201ENST00000617424 182 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 AC099654.7-201ENST00000635788 2127 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC5.49□□□□□ -1.53
GFRA3O60609 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA3O60609 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
GFRA3O60609 AL353743.1-202ENST00000431724 1695 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA3O60609 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.49□□□□□ -1.53
GFRA3O60609 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC5.49□□□□□ -1.53
GFRA3O60609 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.49□□□□□ -1.53
GFRA3O60609 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
GFRA3O60609 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA3O60609 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 LRRC37A16P-202ENST00000586022 3725 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 AL137141.1-201ENST00000624622 4836 ntBASIC5.49□□□□□ -1.53
GFRA3O60609 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
GFRA3O60609 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
GFRA3O60609 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA3O60609 BIN2P1-201ENST00000504996 1530 ntBASIC5.48□□□□□ -1.53
GFRA3O60609 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA3O60609 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.48□□□□□ -1.53
GFRA3O60609 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA3O60609 AC005618.1-201ENST00000606901 3148 ntBASIC5.48□□□□□ -1.53
GFRA3O60609 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA3O60609 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC5.48□□□□□ -1.53
GFRA3O60609 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA3O60609 AL033543.1-201ENST00000623440 13454 ntBASIC5.48□□□□□ -1.53
GFRA3O60609 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA3O60609 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.48□□□□□ -1.53
GFRA3O60609 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA3O60609 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
GFRA3O60609 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms