Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.69□□□□□ -1.82
SMAD6O43541 RNU6-420P-201ENST00000458780 107 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 RN7SL330P-201ENST00000469709 307 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
SMAD6O43541 FAM172BP-201ENST00000487497 1089 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 AC114967.1-201ENST00000504890 259 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC3.69□□□□□ -1.82
SMAD6O43541 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.69□□□□□ -1.82
SMAD6O43541 HIGD1AP3-201ENST00000515857 278 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 RN7SKP13-201ENST00000515933 244 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 RN7SKP96-201ENST00000516948 297 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 RNU6-445P-201ENST00000516949 107 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.69□□□□□ -1.82
SMAD6O43541 AC125611.2-201ENST00000551907 647 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.69□□□□□ -1.82
SMAD6O43541 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.69□□□□□ -1.82
SMAD6O43541 SULT1C2P1-202ENST00000562418 459 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC3.69□□□□□ -1.82
SMAD6O43541 AC034268.2-201ENST00000571784 482 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 MIR4795-201ENST00000584182 89 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.69□□□□□ -1.82
SMAD6O43541 AP001429.1-201ENST00000602568 530 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.69□□□□□ -1.82
SMAD6O43541 AC093788.1-201ENST00000609356 927 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 AL161734.1-201ENST00000609720 557 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 MIR6075-201ENST00000620782 95 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 PLCE1P1-201ENST00000622094 305 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 VPS8-228ENST00000628962 207 ntTSL 5 BASIC3.69□□□□□ -1.82
SMAD6O43541 AC244205.2-202ENST00000635781 342 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.69□□□□□ -1.82
SMAD6O43541 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.69□□□□□ -1.82
SMAD6O43541 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SMAD6O43541 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.69□□□□□ -1.82
SMAD6O43541 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
SMAD6O43541 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
SMAD6O43541 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
SMAD6O43541 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.69□□□□□ -1.82
SMAD6O43541 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
SMAD6O43541 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
SMAD6O43541 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.68□□□□□ -1.82
SMAD6O43541 AC007656.2-201ENST00000624902 4547 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC3.68□□□□□ -1.82
SMAD6O43541 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.68□□□□□ -1.82
SMAD6O43541 OR5J1P-201ENST00000313544 939 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
SMAD6O43541 RNA5SP119-201ENST00000362715 117 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 Y_RNA.159-201ENST00000363674 87 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 RNU6-444P-201ENST00000383988 108 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 DHFRP6-201ENST00000401776 268 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SMAD6O43541 HSPE1P8-201ENST00000406997 288 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 MTND3P17-201ENST00000416968 344 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 DBIP2-201ENST00000419076 262 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC3.68□□□□□ -1.82
SMAD6O43541 SNRPGP6-201ENST00000451124 220 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.68□□□□□ -1.82
SMAD6O43541 RPL39P36-201ENST00000490784 156 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 RPL23AP55-201ENST00000498163 452 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.68□□□□□ -1.82
SMAD6O43541 MTCO3P9-201ENST00000506989 781 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 HMGB3P15-201ENST00000507326 574 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 RNU6-488P-201ENST00000515918 99 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 RN7SKP209-201ENST00000516888 304 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.68□□□□□ -1.82
SMAD6O43541 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC3.68□□□□□ -1.82
SMAD6O43541 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC3.68□□□□□ -1.82
SMAD6O43541 RANP9-201ENST00000519957 271 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 IGKV2D-19-201ENST00000523346 262 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.68□□□□□ -1.82
SMAD6O43541 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.68□□□□□ -1.82
SMAD6O43541 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.68□□□□□ -1.82
SMAD6O43541 SYF2P1-201ENST00000550658 413 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 MIR5186-201ENST00000577504 120 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 MIR3690-201ENST00000580266 75 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 MAGOH2P-202ENST00000584384 429 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.68□□□□□ -1.82
SMAD6O43541 AL162413.1-201ENST00000603198 110 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 AC010591.1-201ENST00000603941 649 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 AC007621.1-201ENST00000604544 437 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 MIR98-201ENST00000606724 119 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.68□□□□□ -1.82
SMAD6O43541 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMAD6O43541 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.68□□□□□ -1.82
SMAD6O43541 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMAD6O43541 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMAD6O43541 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.68□□□□□ -1.82
SMAD6O43541 CCT4P2-201ENST00000233836 1548 ntBASIC3.68□□□□□ -1.82
SMAD6O43541 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
SMAD6O43541 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.68□□□□□ -1.82
SMAD6O43541 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
SMAD6O43541 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.68□□□□□ -1.82
SMAD6O43541 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.68□□□□□ -1.82
SMAD6O43541 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SMAD6O43541 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
SMAD6O43541 AC006504.1-201ENST00000562493 3666 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
SMAD6O43541 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
SMAD6O43541 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
SMAD6O43541 RNU6-878P-201ENST00000384578 110 ntBASIC3.67□□□□□ -1.82
SMAD6O43541 FAT1P1-201ENST00000406588 507 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 111.6 ms