Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 Y_RNA.2-201ENST00000362330 96 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 Y_RNA.26-201ENST00000362539 101 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 Y_RNA.150-201ENST00000363562 102 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 Y_RNA.399-201ENST00000383955 105 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 RNU6-701P-201ENST00000384059 107 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 Y_RNA.462-201ENST00000384268 102 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 RPLP0P7-201ENST00000416050 667 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 RPL23AP69-201ENST00000431134 458 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 RPL21P112-201ENST00000434403 463 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 AL590399.6-201ENST00000446396 307 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 AC133473.1-201ENST00000455173 299 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 RPL7AP28-201ENST00000464513 571 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 RN7SL466P-201ENST00000497546 295 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 SNORA14.1-201ENST00000516113 141 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 RNU6-1332P-201ENST00000516666 104 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 RNU6-685P-201ENST00000517088 95 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 RN7SKP92-201ENST00000517266 244 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 IGKV2D-23-201ENST00000518179 286 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 AC091516.1-201ENST00000549191 703 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 SUB1P3-201ENST00000564581 315 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 SDR42E1P2-201ENST00000614861 481 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 SDR42E1P4-201ENST00000620894 481 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 AC132068.1-201ENST00000623805 459 ntBASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 ATXN3L-201ENST00000380622 2164 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
TRIM42Q8IWZ5 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 SNORD62.1-201ENST00000362541 86 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 SNORA51.1-201ENST00000363243 140 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 RNU6-187P-201ENST00000384139 106 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 RNU6-306P-201ENST00000384617 107 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 MIR135A2-201ENST00000384854 100 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 RNA5SP111-201ENST00000411386 101 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 AC079355.1-201ENST00000421770 223 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 AL606753.1-201ENST00000427435 87 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 MRPS18BP2-201ENST00000434310 759 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 CYCSP43-201ENST00000438233 310 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 NOTCH2P1-201ENST00000443481 624 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 RPL29P29-201ENST00000448725 423 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 IFNWP4-201ENST00000453148 294 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 VN1R105P-201ENST00000486595 910 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 SNORA40.14-201ENST00000516543 86 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 AC040926.1-201ENST00000530195 238 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 AL161713.1-201ENST00000555538 145 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 AC009779.6-201ENST00000603972 165 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 AL158032.1-201ENST00000605401 106 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 MIR6768-201ENST00000610734 72 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 MIR4272-201ENST00000635924 64 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 MAPK10-304ENST00000641341 3984 ntBASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 TCP11X1-203ENST00000623912 1715 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC5.11□□□□□ -1.59
TRIM42Q8IWZ5 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM42Q8IWZ5 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
TRIM42Q8IWZ5 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM42Q8IWZ5 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
TRIM42Q8IWZ5 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
TRIM42Q8IWZ5 Y_RNA.20-201ENST00000362479 113 ntBASIC5.1□□□□□ -1.59
TRIM42Q8IWZ5 RNU6-1249P-201ENST00000363237 111 ntBASIC5.1□□□□□ -1.59
TRIM42Q8IWZ5 RNU6-662P-201ENST00000384253 104 ntBASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 107.4 ms