Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLCN1P35523 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
CLCN1P35523 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLCN1P35523 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLCN1P35523 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
CLCN1P35523 AL159987.1-201ENST00000347911 293 ntBASIC6.14□□□□□ -1.43
CLCN1P35523 Y_RNA.33-201ENST00000362591 102 ntBASIC6.14□□□□□ -1.43
CLCN1P35523 MIR215-201ENST00000384858 110 ntBASIC6.14□□□□□ -1.43
CLCN1P35523 RNA5SP494-201ENST00000410653 129 ntBASIC6.14□□□□□ -1.43
CLCN1P35523 DPPA2P3-201ENST00000411853 655 ntBASIC6.14□□□□□ -1.43
CLCN1P35523 AL513331.1-201ENST00000411908 397 ntBASIC6.14□□□□□ -1.43
CLCN1P35523 AP000275.1-201ENST00000411943 390 ntBASIC6.14□□□□□ -1.43
CLCN1P35523 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC6.14□□□□□ -1.43
CLCN1P35523 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLCN1P35523 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC6.14□□□□□ -1.43
CLCN1P35523 AC087650.1-201ENST00000431445 468 ntBASIC6.14□□□□□ -1.43
CLCN1P35523 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.14□□□□□ -1.43
CLCN1P35523 AL445433.1-201ENST00000457507 257 ntBASIC6.14□□□□□ -1.43
CLCN1P35523 DUTP1-201ENST00000493631 470 ntBASIC6.14□□□□□ -1.43
CLCN1P35523 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC6.14□□□□□ -1.43
CLCN1P35523 AC114781.3-201ENST00000512083 142 ntBASIC6.14□□□□□ -1.43
CLCN1P35523 RN7SKP46-201ENST00000515942 234 ntBASIC6.14□□□□□ -1.43
CLCN1P35523 HMGN2P36-201ENST00000529541 409 ntBASIC6.14□□□□□ -1.43
CLCN1P35523 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC6.14□□□□□ -1.43
CLCN1P35523 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.14□□□□□ -1.43
CLCN1P35523 FAM27E4-201ENST00000605259 342 ntBASIC6.14□□□□□ -1.43
CLCN1P35523 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLCN1P35523 uc_338.7-201ENST00000621834 124 ntBASIC6.14□□□□□ -1.43
CLCN1P35523 POU2F2-219ENST00000625670 371 ntTSL 5 BASIC6.14□□□□□ -1.43
CLCN1P35523 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.14□□□□□ -1.43
CLCN1P35523 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC6.14□□□□□ -1.43
CLCN1P35523 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLCN1P35523 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLCN1P35523 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLCN1P35523 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLCN1P35523 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
CLCN1P35523 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC6.14□□□□□ -1.43
CLCN1P35523 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLCN1P35523 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLCN1P35523 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
CLCN1P35523 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
CLCN1P35523 AC000123.3-201ENST00000624029 4975 ntBASIC6.14□□□□□ -1.43
CLCN1P35523 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC6.13□□□□□ -1.43
CLCN1P35523 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLCN1P35523 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.13□□□□□ -1.43
CLCN1P35523 AL049555.1-201ENST00000562834 1933 ntBASIC6.13□□□□□ -1.43
CLCN1P35523 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC6.13□□□□□ -1.43
CLCN1P35523 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLCN1P35523 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLCN1P35523 Y_RNA.27-201ENST00000362540 103 ntBASIC6.13□□□□□ -1.43
CLCN1P35523 Y_RNA.274-201ENST00000364714 101 ntBASIC6.13□□□□□ -1.43
CLCN1P35523 Y_RNA.352-201ENST00000365439 102 ntBASIC6.13□□□□□ -1.43
CLCN1P35523 MIR130A-201ENST00000385274 89 ntBASIC6.13□□□□□ -1.43
CLCN1P35523 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.13□□□□□ -1.43
CLCN1P35523 AC093414.1-201ENST00000434712 514 ntBASIC6.13□□□□□ -1.43
CLCN1P35523 AL359073.1-201ENST00000448036 403 ntBASIC6.13□□□□□ -1.43
CLCN1P35523 AC074250.1-201ENST00000511117 192 ntBASIC6.13□□□□□ -1.43
CLCN1P35523 Y_RNA.713-201ENST00000517013 96 ntBASIC6.13□□□□□ -1.43
CLCN1P35523 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.13□□□□□ -1.43
CLCN1P35523 DEFB108E-201ENST00000524692 240 ntBASIC6.13□□□□□ -1.43
CLCN1P35523 SMILR-201ENST00000533992 553 ntTSL 4 BASIC6.13□□□□□ -1.43
CLCN1P35523 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.13□□□□□ -1.43
CLCN1P35523 PACRG-210ENST00000611387 279 ntTSL 5 BASIC6.13□□□□□ -1.43
CLCN1P35523 MIR6729-201ENST00000618194 65 ntBASIC6.13□□□□□ -1.43
CLCN1P35523 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC6.13□□□□□ -1.43
CLCN1P35523 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.43
CLCN1P35523 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
CLCN1P35523 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC6.13□□□□□ -1.43
CLCN1P35523 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
CLCN1P35523 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6.12□□□□□ -1.43
CLCN1P35523 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CLCN1P35523 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
CLCN1P35523 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC6.12□□□□□ -1.43
CLCN1P35523 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
CLCN1P35523 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CLCN1P35523 AC007685.1-201ENST00000329806 452 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 RLIMP1-201ENST00000339626 1680 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 RNU6-774P-201ENST00000363238 107 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 RNA5SP433-201ENST00000364491 114 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 RNU6-827P-201ENST00000365553 106 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 MIR153-1-201ENST00000384914 90 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CLCN1P35523 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
CLCN1P35523 AL603910.2-201ENST00000407268 136 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 RNA5SP36-201ENST00000410197 133 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 AL035660.1-201ENST00000422041 222 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 PPIAP20-201ENST00000449839 135 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 AL513124.1-201ENST00000450410 614 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 NXT1P1-201ENST00000458481 316 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 AC087588.1-201ENST00000462203 316 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC6.12□□□□□ -1.43
CLCN1P35523 RPL32P33-201ENST00000487023 394 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 RPL30P10-201ENST00000488148 337 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 AC067942.3-201ENST00000512025 362 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 SNORD116-26-201ENST00000516006 96 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 RNU4-71P-201ENST00000516258 113 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 AC021678.3-201ENST00000517893 476 ntBASIC6.12□□□□□ -1.43
CLCN1P35523 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
CLCN1P35523 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
CLCN1P35523 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms