Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 AC146507.2-201ENST00000460608 476 ntBASIC3.06□□□□□ -1.92
HLA-DPA1P20036 AC104090.1-201ENST00000506341 1171 ntBASIC3.06□□□□□ -1.92
HLA-DPA1P20036 CDC42P4-201ENST00000510507 563 ntBASIC3.06□□□□□ -1.92
HLA-DPA1P20036 OR5BM1P-201ENST00000512021 366 ntBASIC3.06□□□□□ -1.92
HLA-DPA1P20036 MTCYBP43-201ENST00000513621 740 ntBASIC3.06□□□□□ -1.92
HLA-DPA1P20036 AC023538.1-201ENST00000534576 736 ntBASIC3.06□□□□□ -1.92
HLA-DPA1P20036 AC128657.1-201ENST00000549459 145 ntBASIC3.06□□□□□ -1.92
HLA-DPA1P20036 UBE2L4-201ENST00000587688 464 ntBASIC3.06□□□□□ -1.92
HLA-DPA1P20036 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.06□□□□□ -1.92
HLA-DPA1P20036 MTCO2P2-201ENST00000591258 225 ntBASIC3.06□□□□□ -1.92
HLA-DPA1P20036 AC019159.1-201ENST00000605094 187 ntBASIC3.06□□□□□ -1.92
HLA-DPA1P20036 RNU6-88P-201ENST00000606801 100 ntBASIC3.06□□□□□ -1.92
HLA-DPA1P20036 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
HLA-DPA1P20036 AC004696.1-201ENST00000614345 607 ntBASIC3.06□□□□□ -1.92
HLA-DPA1P20036 AL158801.5-201ENST00000623123 465 ntBASIC3.06□□□□□ -1.92
HLA-DPA1P20036 AP001002.2-201ENST00000625137 386 ntBASIC3.06□□□□□ -1.92
HLA-DPA1P20036 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
HLA-DPA1P20036 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.05□□□□□ -1.92
HLA-DPA1P20036 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DPA1P20036 RNU6-140P-201ENST00000384566 108 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 AL031121.1-201ENST00000406553 254 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 AC106883.1-201ENST00000418805 562 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 TXNL1P1-201ENST00000429528 554 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 AC084290.1-201ENST00000434995 374 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 AL117351.1-201ENST00000438864 766 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 AC004854.1-201ENST00000440356 349 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 CYCSP32-201ENST00000440548 321 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 RPL31P41-201ENST00000477967 372 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 RN7SL633P-201ENST00000488974 297 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 AC093809.1-201ENST00000509155 340 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DPA1P20036 RN7SKP43-201ENST00000516173 320 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 RN7SKP272-201ENST00000516988 232 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DPA1P20036 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC3.05□□□□□ -1.92
HLA-DPA1P20036 PSMA2P1-201ENST00000526365 646 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 AC010546.1-201ENST00000569391 485 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.05□□□□□ -1.92
HLA-DPA1P20036 VN1R82P-201ENST00000601481 356 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 AP000484.1-201ENST00000620067 1252 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.05□□□□□ -1.92
HLA-DPA1P20036 AL035425.3-201ENST00000564206 4996 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 AC093010.3-201ENST00000570269 15214 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
HLA-DPA1P20036 AC026241.1-201ENST00000517873 2142 ntBASIC3.05□□□□□ -1.92
HLA-DPA1P20036 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
HLA-DPA1P20036 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AL353743.1-202ENST00000431724 1695 ntBASIC3.04□□□□□ -1.92
HLA-DPA1P20036 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 FTLP6-201ENST00000355274 422 ntBASIC3.04□□□□□ -1.92
HLA-DPA1P20036 SNORD56.5-201ENST00000364281 72 ntBASIC3.04□□□□□ -1.92
HLA-DPA1P20036 RNU6-1180P-201ENST00000364935 107 ntBASIC3.04□□□□□ -1.92
HLA-DPA1P20036 SNORA54-201ENST00000384281 123 ntBASIC3.04□□□□□ -1.92
HLA-DPA1P20036 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 MTCO2P8-201ENST00000412213 658 ntBASIC3.04□□□□□ -1.92
HLA-DPA1P20036 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 ELOCP9-201ENST00000418624 239 ntBASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AC109583.1-201ENST00000432156 268 ntBASIC3.04□□□□□ -1.92
HLA-DPA1P20036 RPS15AP27-201ENST00000449183 343 ntBASIC3.04□□□□□ -1.92
HLA-DPA1P20036 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 RNU6-390P-201ENST00000516259 103 ntBASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 ATP5F1P5-201ENST00000526403 760 ntBASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AL391261.3-201ENST00000557194 520 ntBASIC3.04□□□□□ -1.92
HLA-DPA1P20036 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 MIR4325-201ENST00000583049 90 ntBASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AC005498.1-201ENST00000592125 465 ntBASIC3.04□□□□□ -1.92
HLA-DPA1P20036 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AL137843.1-201ENST00000605078 385 ntBASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AL162274.2-201ENST00000614406 332 ntBASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
HLA-DPA1P20036 AC106754.1-201ENST00000562632 1513 ntBASIC3.03□□□□□ -1.92
HLA-DPA1P20036 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
HLA-DPA1P20036 MTND5P27-201ENST00000428871 1720 ntBASIC3.03□□□□□ -1.92
HLA-DPA1P20036 RN7SKP266-201ENST00000410232 287 ntBASIC3.03□□□□□ -1.92
HLA-DPA1P20036 RNU6-757P-201ENST00000410334 100 ntBASIC3.03□□□□□ -1.92
HLA-DPA1P20036 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 138.9 ms