Protein–RNA interactions for Protein: Q9H9C1

VIPAS39, Spermatogenesis-defective protein 39 homolog, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39Q9H9C1 MTCYBP36-201ENST00000404146 440 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 RNU4-72P-201ENST00000410754 173 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 RNU6-516P-201ENST00000411381 104 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 RPL7P8-201ENST00000411964 730 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AC092447.3-201ENST00000426027 686 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 CDC27P1-201ENST00000445384 715 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 RPS3AP43-201ENST00000479743 781 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AL049874.1-201ENST00000489560 388 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AF131216.2-201ENST00000512316 564 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 SCARNA13-201ENST00000516672 275 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AC068587.4-201ENST00000533893 186 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AL391156.1-201ENST00000554965 554 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AP001004.1-201ENST00000582468 324 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AC068313.1-201ENST00000604028 1008 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AP000787.2-201ENST00000604432 568 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AP002826.1-201ENST00000608835 315 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AC004223.4-201ENST00000612426 332 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AL603758.1-201ENST00000618654 241 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AC068831.8-201ENST00000620171 435 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AF246928.1-201ENST00000623768 87 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AC079248.2-201ENST00000623779 326 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 CCT4P2-201ENST00000233836 1548 ntBASIC3.03□□□□□ -1.92
VIPAS39Q9H9C1 AC103988.1-201ENST00000566382 2177 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 RNU5A-1-201ENST00000362698 116 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 RNU1-39P-201ENST00000383897 165 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 SNORD21-201ENST00000383953 95 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 SNORA7.4-201ENST00000384249 137 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 RNU4-65P-201ENST00000410473 140 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 RN7SKP159-201ENST00000410657 292 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 RNU6-920P-201ENST00000410926 92 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 VPS26BP1-201ENST00000417155 755 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 PPP1R11P2-201ENST00000423543 382 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 MTND4P20-201ENST00000424125 869 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 RPL17P49-201ENST00000443728 411 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 GDI2P2-201ENST00000445131 608 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 TPT1P14-201ENST00000448018 505 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 AC093392.2-201ENST00000450682 337 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 MTCO1P42-201ENST00000457379 726 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 MTND4LP31-201ENST00000514859 294 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 HMGB1P41-201ENST00000520234 440 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 FAM60DP-201ENST00000524174 632 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 MIR4307-201ENST00000582802 84 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 AC105224.1-201ENST00000587055 421 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 AC122133.1-201ENST00000613964 233 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 AC007494.3-201ENST00000624660 743 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 AC019226.1-201ENST00000625666 515 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 AC019226.2-201ENST00000625973 424 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 AC011460.1-201ENST00000636268 1834 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 AC005832.2-201ENST00000538921 1430 ntBASIC3.02□□□□□ -1.93
VIPAS39Q9H9C1 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC3.01□□□□□ -1.93
VIPAS39Q9H9C1 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.01□□□□□ -1.93
VIPAS39Q9H9C1 RNU6-500P-201ENST00000362349 107 ntBASIC3.01□□□□□ -1.93
VIPAS39Q9H9C1 Y_RNA.97-201ENST00000363094 102 ntBASIC3.01□□□□□ -1.93
VIPAS39Q9H9C1 RNU5F-7P-201ENST00000363696 115 ntBASIC3.01□□□□□ -1.93
VIPAS39Q9H9C1 RNA5SP515-201ENST00000364570 118 ntBASIC3.01□□□□□ -1.93
VIPAS39Q9H9C1 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.01□□□□□ -1.93
VIPAS39Q9H9C1 RNU6-809P-201ENST00000384461 107 ntBASIC3.01□□□□□ -1.93
VIPAS39Q9H9C1 MIR512-1-201ENST00000384913 84 ntBASIC3.01□□□□□ -1.93
VIPAS39Q9H9C1 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
VIPAS39Q9H9C1 RNU6ATAC-201ENST00000408749 126 ntBASIC3.01□□□□□ -1.93
VIPAS39Q9H9C1 RPL23AP39-201ENST00000415533 405 ntBASIC3.01□□□□□ -1.93
VIPAS39Q9H9C1 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.01□□□□□ -1.93
VIPAS39Q9H9C1 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.01□□□□□ -1.93
VIPAS39Q9H9C1 AC073063.1-201ENST00000434352 607 ntBASIC3.01□□□□□ -1.93
VIPAS39Q9H9C1 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.01□□□□□ -1.93
VIPAS39Q9H9C1 RNA5SP310-201ENST00000459084 116 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 150.1 ms