Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AC012433.1-201ENST00000588916 398 ntBASIC5.66□□□□□ -1.5
RNF135Q8IUD6 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 RAC1P9-201ENST00000604990 392 ntBASIC5.66□□□□□ -1.5
RNF135Q8IUD6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 ABCC13-202ENST00000463099 3842 ntBASIC5.66□□□□□ -1.5
RNF135Q8IUD6 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
RNF135Q8IUD6 MAPK10-338ENST00000641647 3362 ntBASIC5.66□□□□□ -1.5
RNF135Q8IUD6 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF135Q8IUD6 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF135Q8IUD6 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RNF135Q8IUD6 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.65□□□□□ -1.5
RNF135Q8IUD6 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
RNF135Q8IUD6 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
RNF135Q8IUD6 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
RNF135Q8IUD6 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF135Q8IUD6 Y_RNA.20-201ENST00000362479 113 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 RNA5SP453-201ENST00000362503 119 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 RN7SKP113-201ENST00000363891 295 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 RNA5SP240-201ENST00000365355 128 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 AL009179.1-201ENST00000406085 265 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 RNU6-325P-201ENST00000411132 105 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 CYCSP33-201ENST00000414485 327 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 RAC1P3-201ENST00000416129 580 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF135Q8IUD6 DNAJC19P7-201ENST00000428811 344 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 AC138761.5-201ENST00000433967 325 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 AC113155.1-201ENST00000511141 769 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 GMPSP1-201ENST00000514075 579 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 FTH1P11-201ENST00000517577 551 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF135Q8IUD6 BNIP3P5-201ENST00000562290 498 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 AC130289.1-201ENST00000577321 73 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 AP005403.1-201ENST00000579720 229 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 VN1R91P-201ENST00000594377 169 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC5.65□□□□□ -1.5
RNF135Q8IUD6 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.65□□□□□ -1.5
RNF135Q8IUD6 SNORD91B-202ENST00000608459 222 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 SNORD39.4-201ENST00000620099 78 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 MIR6758-201ENST00000620653 63 ntBASIC5.65□□□□□ -1.5
RNF135Q8IUD6 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF135Q8IUD6 AL807742.1-203ENST00000637444 759 ntTSL 5 BASIC5.65□□□□□ -1.5
RNF135Q8IUD6 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.65□□□□□ -1.5
RNF135Q8IUD6 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.65□□□□□ -1.51
RNF135Q8IUD6 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
RNF135Q8IUD6 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF135Q8IUD6 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF135Q8IUD6 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.65□□□□□ -1.51
RNF135Q8IUD6 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.65□□□□□ -1.51
RNF135Q8IUD6 AL353796.1-201ENST00000561542 3241 ntBASIC5.65□□□□□ -1.51
RNF135Q8IUD6 STX3-208ENST00000641815 3236 ntBASIC5.65□□□□□ -1.51
RNF135Q8IUD6 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 RNU6-280P-201ENST00000364145 104 ntBASIC5.64□□□□□ -1.51
RNF135Q8IUD6 RNU6-356P-201ENST00000384140 107 ntBASIC5.64□□□□□ -1.51
RNF135Q8IUD6 MIR625-201ENST00000385047 85 ntBASIC5.64□□□□□ -1.51
RNF135Q8IUD6 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 AL353621.1-201ENST00000418219 243 ntBASIC5.64□□□□□ -1.51
RNF135Q8IUD6 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 AC099670.2-201ENST00000435130 321 ntBASIC5.64□□□□□ -1.51
RNF135Q8IUD6 PTMAP3-201ENST00000447474 330 ntBASIC5.64□□□□□ -1.51
RNF135Q8IUD6 OR2AQ1P-201ENST00000451972 200 ntBASIC5.64□□□□□ -1.51
RNF135Q8IUD6 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 RN7SL354P-201ENST00000469282 294 ntBASIC5.64□□□□□ -1.51
RNF135Q8IUD6 RN7SL817P-201ENST00000480777 288 ntBASIC5.64□□□□□ -1.51
RNF135Q8IUD6 GLUD1P3-202ENST00000508551 200 ntBASIC5.64□□□□□ -1.51
RNF135Q8IUD6 Y_RNA.687-201ENST00000516558 91 ntBASIC5.64□□□□□ -1.51
RNF135Q8IUD6 SNORA40.15-201ENST00000516884 107 ntBASIC5.64□□□□□ -1.51
RNF135Q8IUD6 SCARNA16.4-201ENST00000516956 187 ntBASIC5.64□□□□□ -1.51
RNF135Q8IUD6 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 SARNP-203ENST00000552080 726 ntTSL 2 BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 AC093799.2-201ENST00000610062 578 ntBASIC5.64□□□□□ -1.51
RNF135Q8IUD6 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
RNF135Q8IUD6 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF135Q8IUD6 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF135Q8IUD6 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF135Q8IUD6 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.63□□□□□ -1.51
RNF135Q8IUD6 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF135Q8IUD6 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms