Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 KNOP1P3-201ENST00000446933 426 ntBASIC5.93□□□□□ -1.46
HOXA2O43364 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC5.93□□□□□ -1.46
HOXA2O43364 AL389915.2-201ENST00000454576 441 ntBASIC5.93□□□□□ -1.46
HOXA2O43364 RNU7-87P-201ENST00000459343 62 ntBASIC5.93□□□□□ -1.46
HOXA2O43364 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC5.93□□□□□ -1.46
HOXA2O43364 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXA2O43364 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.93□□□□□ -1.46
HOXA2O43364 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXA2O43364 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXA2O43364 RNU6-927P-201ENST00000516199 100 ntBASIC5.93□□□□□ -1.46
HOXA2O43364 SNORA31.22-201ENST00000517204 135 ntBASIC5.93□□□□□ -1.46
HOXA2O43364 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.93□□□□□ -1.46
HOXA2O43364 TRAV37-201ENST00000553906 342 ntBASIC5.93□□□□□ -1.46
HOXA2O43364 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC5.93□□□□□ -1.46
HOXA2O43364 MIR4700-201ENST00000578311 74 ntBASIC5.93□□□□□ -1.46
HOXA2O43364 RN7SL708P-201ENST00000580952 299 ntBASIC5.93□□□□□ -1.46
HOXA2O43364 RNU6-6P-201ENST00000606623 107 ntBASIC5.93□□□□□ -1.46
HOXA2O43364 AC107294.1-201ENST00000609524 467 ntBASIC5.93□□□□□ -1.46
HOXA2O43364 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXA2O43364 AC073869.8-201ENST00000641806 335 ntBASIC5.93□□□□□ -1.46
HOXA2O43364 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXA2O43364 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXA2O43364 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXA2O43364 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
HOXA2O43364 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXA2O43364 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
HOXA2O43364 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
HOXA2O43364 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.93□□□□□ -1.46
HOXA2O43364 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA2O43364 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA2O43364 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
HOXA2O43364 MDM2-206ENST00000350057 1401 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA2O43364 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA2O43364 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXA2O43364 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA2O43364 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA2O43364 UBE2L2-201ENST00000254302 429 ntBASIC5.92□□□□□ -1.46
HOXA2O43364 RPL23P2-201ENST00000320371 421 ntBASIC5.92□□□□□ -1.46
HOXA2O43364 RNA5SP305-201ENST00000362665 119 ntBASIC5.92□□□□□ -1.46
HOXA2O43364 SNORD50.1-201ENST00000362987 71 ntBASIC5.92□□□□□ -1.46
HOXA2O43364 RNU6-1249P-201ENST00000363237 111 ntBASIC5.92□□□□□ -1.46
HOXA2O43364 SNORD113-8-201ENST00000363497 74 ntBASIC5.92□□□□□ -1.46
HOXA2O43364 RNA5SP223-201ENST00000365174 120 ntBASIC5.92□□□□□ -1.46
HOXA2O43364 RNU6-827P-201ENST00000365553 106 ntBASIC5.92□□□□□ -1.46
HOXA2O43364 RNY1P5-201ENST00000383890 115 ntBASIC5.92□□□□□ -1.46
HOXA2O43364 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HOXA2O43364 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
HOXA2O43364 AL033519.2-201ENST00000403958 392 ntBASIC5.92□□□□□ -1.46
HOXA2O43364 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXA2O43364 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC5.92□□□□□ -1.46
HOXA2O43364 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXA2O43364 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXA2O43364 GSTM5P1-201ENST00000434751 660 ntBASIC5.92□□□□□ -1.46
HOXA2O43364 RPL37P6-202ENST00000464216 403 ntBASIC5.92□□□□□ -1.46
HOXA2O43364 RPS18P6-201ENST00000476880 458 ntBASIC5.92□□□□□ -1.46
HOXA2O43364 CASP1P1-201ENST00000526345 212 ntBASIC5.92□□□□□ -1.46
HOXA2O43364 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXA2O43364 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXA2O43364 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC5.92□□□□□ -1.46
HOXA2O43364 AC097372.5-201ENST00000623665 376 ntBASIC5.92□□□□□ -1.46
HOXA2O43364 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA2O43364 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXA2O43364 CARF-208ENST00000428585 2513 ntTSL 2 BASIC5.92□□□□□ -1.46
HOXA2O43364 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
HOXA2O43364 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
HOXA2O43364 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA2O43364 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
HOXA2O43364 AC007785.2-201ENST00000598627 1916 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.91□□□□□ -1.46
HOXA2O43364 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA2O43364 BCORP1-203ENST00000513194 5093 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 AC005725.1-201ENST00000577346 2607 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA2O43364 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA2O43364 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.91□□□□□ -1.46
HOXA2O43364 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA2O43364 Y_RNA.33-201ENST00000362591 102 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 Y_RNA.170-201ENST00000363746 110 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 RNU6-704P-201ENST00000364162 103 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 RNU6-882P-201ENST00000391025 103 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 SNORA12.2-201ENST00000391040 156 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA2O43364 SNORD56-201ENST00000413522 71 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA2O43364 DNAJC19P7-201ENST00000428811 344 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 RPL12P3-201ENST00000440080 396 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA2O43364 RN7SL97P-201ENST00000486780 299 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 AC093815.1-201ENST00000508637 280 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 Y_RNA.706-201ENST00000516933 99 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 AC069307.1-201ENST00000602820 447 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 AC109583.2-201ENST00000617367 129 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 U73479.1-201ENST00000618062 168 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC5.91□□□□□ -1.46
HOXA2O43364 AC021753.1-201ENST00000635724 168 ntBASIC5.91□□□□□ -1.46
HOXA2O43364 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA2O43364 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA2O43364 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA2O43364 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
HOXA2O43364 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms