Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 AC026471.1-201ENST00000564629 3026 ntBASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CLCA3PQ9Y6N3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 AP003071.4-201ENST00000562276 1284 ntBASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 AC026271.3-201ENST00000571884 352 ntBASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 LINC01465-201ENST00000408887 1940 ntBASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CLCA3PQ9Y6N3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 AC004980.1-204ENST00000429707 299 ntBASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 ZNF815P-204ENST00000434898 1737 ntBASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CLCA3PQ9Y6N3 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.04■□□□□ 0.48
CLCA3PQ9Y6N3 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 AC116562.4-201ENST00000641316 2276 ntBASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
CLCA3PQ9Y6N3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms