Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 RCC2P6-201ENST00000526625 1557 ntBASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 B3GAT3P1-201ENST00000471720 806 ntBASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 AC011506.1-201ENST00000474329 610 ntBASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 LINC01238-205ENST00000567549 1107 ntBASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 FSCN1P1-201ENST00000568912 1481 ntBASIC19.41■□□□□ 0.7
PCDHB9Q9Y5E1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
PCDHB9Q9Y5E1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHB9Q9Y5E1 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHB9Q9Y5E1 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
PCDHB9Q9Y5E1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
PCDHB9Q9Y5E1 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 MESTP1-201ENST00000404287 994 ntBASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 AC004951.3-201ENST00000418645 1148 ntBASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 WWOX-216ENST00000569818 525 ntBASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 AC011298.2-201ENST00000617989 482 ntBASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 KRT8P41-201ENST00000533985 1514 ntBASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
PCDHB9Q9Y5E1 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB9Q9Y5E1 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB9Q9Y5E1 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB9Q9Y5E1 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB9Q9Y5E1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHB9Q9Y5E1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB9Q9Y5E1 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB9Q9Y5E1 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB9Q9Y5E1 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHB9Q9Y5E1 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB9Q9Y5E1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB9Q9Y5E1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.38■□□□□ 0.69
PCDHB9Q9Y5E1 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.38■□□□□ 0.69
PCDHB9Q9Y5E1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PCDHB9Q9Y5E1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.38■□□□□ 0.69
PCDHB9Q9Y5E1 AC128688.1-201ENST00000487626 519 ntBASIC19.38■□□□□ 0.69
PCDHB9Q9Y5E1 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms