Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 MDFI-202ENST00000373050 809 ntTSL 2 BASIC19.19■□□□□ 0.66
PKP3Q9Y446 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.19■□□□□ 0.66
PKP3Q9Y446 TSPY21P-201ENST00000433481 731 ntBASIC19.19■□□□□ 0.66
PKP3Q9Y446 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PKP3Q9Y446 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.19■□□□□ 0.66
PKP3Q9Y446 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.19■□□□□ 0.66
PKP3Q9Y446 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PKP3Q9Y446 AC113410.3-201ENST00000623366 203 ntBASIC19.19■□□□□ 0.66
PKP3Q9Y446 ABBA01031674.1-201ENST00000635145 728 ntBASIC19.19■□□□□ 0.66
PKP3Q9Y446 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PKP3Q9Y446 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.19■□□□□ 0.66
PKP3Q9Y446 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PKP3Q9Y446 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.19■□□□□ 0.66
PKP3Q9Y446 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PKP3Q9Y446 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PKP3Q9Y446 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PKP3Q9Y446 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PKP3Q9Y446 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PKP3Q9Y446 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PKP3Q9Y446 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
PKP3Q9Y446 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.19■□□□□ 0.66
PKP3Q9Y446 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
PKP3Q9Y446 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PKP3Q9Y446 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PKP3Q9Y446 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.18■□□□□ 0.66
PKP3Q9Y446 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PKP3Q9Y446 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PKP3Q9Y446 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PKP3Q9Y446 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PKP3Q9Y446 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PKP3Q9Y446 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.18■□□□□ 0.66
PKP3Q9Y446 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PKP3Q9Y446 AC004951.3-201ENST00000418645 1148 ntBASIC19.18■□□□□ 0.66
PKP3Q9Y446 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.18■□□□□ 0.66
PKP3Q9Y446 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.18■□□□□ 0.66
PKP3Q9Y446 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.18■□□□□ 0.66
PKP3Q9Y446 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PKP3Q9Y446 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PKP3Q9Y446 KRT8P41-201ENST00000533985 1514 ntBASIC19.18■□□□□ 0.66
PKP3Q9Y446 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
PKP3Q9Y446 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC19.18■□□□□ 0.66
PKP3Q9Y446 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.18■□□□□ 0.66
PKP3Q9Y446 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.18■□□□□ 0.66
PKP3Q9Y446 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PKP3Q9Y446 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.17■□□□□ 0.66
PKP3Q9Y446 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.17■□□□□ 0.66
PKP3Q9Y446 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.17■□□□□ 0.66
PKP3Q9Y446 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.17■□□□□ 0.66
PKP3Q9Y446 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC19.17■□□□□ 0.66
PKP3Q9Y446 RCC2P6-201ENST00000526625 1557 ntBASIC19.17■□□□□ 0.66
PKP3Q9Y446 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.17■□□□□ 0.66
PKP3Q9Y446 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
PKP3Q9Y446 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.17■□□□□ 0.66
PKP3Q9Y446 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PKP3Q9Y446 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP3Q9Y446 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP3Q9Y446 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.16■□□□□ 0.66
PKP3Q9Y446 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PKP3Q9Y446 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.16■□□□□ 0.66
PKP3Q9Y446 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP3Q9Y446 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP3Q9Y446 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP3Q9Y446 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP3Q9Y446 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP3Q9Y446 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
PKP3Q9Y446 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PKP3Q9Y446 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.16■□□□□ 0.66
PKP3Q9Y446 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.16■□□□□ 0.66
PKP3Q9Y446 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PKP3Q9Y446 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
PKP3Q9Y446 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.16■□□□□ 0.66
PKP3Q9Y446 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.16■□□□□ 0.66
PKP3Q9Y446 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.16■□□□□ 0.66
PKP3Q9Y446 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP3Q9Y446 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PKP3Q9Y446 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP3Q9Y446 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
PKP3Q9Y446 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP3Q9Y446 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PKP3Q9Y446 FSCN1P1-201ENST00000568912 1481 ntBASIC19.16■□□□□ 0.66
PKP3Q9Y446 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms