Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 RNA5SP421-201ENST00000516864 134 ntBASIC7.86□□□□□ -1.15
MACF1Q9UPN3 PNMT-203ENST00000581428 677 ntTSL 2 BASIC7.86□□□□□ -1.15
MACF1Q9UPN3 AP001269.4-201ENST00000609611 512 ntBASIC7.86□□□□□ -1.15
MACF1Q9UPN3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
MACF1Q9UPN3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
MACF1Q9UPN3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC7.86□□□□□ -1.15
MACF1Q9UPN3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC7.86□□□□□ -1.15
MACF1Q9UPN3 DUX4L27-201ENST00000554796 1261 ntBASIC7.86□□□□□ -1.15
MACF1Q9UPN3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
MACF1Q9UPN3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
MACF1Q9UPN3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
MACF1Q9UPN3 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
MACF1Q9UPN3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
MACF1Q9UPN3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
MACF1Q9UPN3 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC7.86□□□□□ -1.15
MACF1Q9UPN3 AC092902.6-201ENST00000641783 218 ntBASIC7.86□□□□□ -1.15
MACF1Q9UPN3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
MACF1Q9UPN3 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
MACF1Q9UPN3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC7.86□□□□□ -1.15
MACF1Q9UPN3 AC025062.2-201ENST00000605477 670 ntBASIC7.86□□□□□ -1.15
MACF1Q9UPN3 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 PTBP1P-201ENST00000554374 1601 ntBASIC7.85□□□□□ -1.15
MACF1Q9UPN3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 CD82-202ENST00000342935 967 ntTSL 5 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 AC003101.2-201ENST00000612557 442 ntBASIC7.85□□□□□ -1.15
MACF1Q9UPN3 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 AL162377.1-201ENST00000618844 1793 ntBASIC7.85□□□□□ -1.15
MACF1Q9UPN3 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 TCAP-202ENST00000578283 583 ntTSL 5 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 PUS1-205ENST00000535067 838 ntTSL 3 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 AC068587.10-201ENST00000641210 219 ntBASIC7.85□□□□□ -1.15
MACF1Q9UPN3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
MACF1Q9UPN3 EED-207ENST00000528180 1745 ntTSL 5 BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 CR383656.12-201ENST00000549567 513 ntBASIC7.84□□□□□ -1.15
MACF1Q9UPN3 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 TBC1D3P2-202ENST00000577902 1649 ntBASIC7.84□□□□□ -1.15
MACF1Q9UPN3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 KRT18P2-201ENST00000447938 1258 ntBASIC7.84□□□□□ -1.15
MACF1Q9UPN3 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 METTL23-205ENST00000588302 925 ntTSL 5 BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 AC139530.1-201ENST00000575312 1977 ntBASIC7.84□□□□□ -1.15
MACF1Q9UPN3 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 AL592071.1-201ENST00000611956 408 ntBASIC7.84□□□□□ -1.15
MACF1Q9UPN3 ANKRD20A8P-203ENST00000641373 517 ntBASIC7.84□□□□□ -1.15
MACF1Q9UPN3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC7.84□□□□□ -1.15
MACF1Q9UPN3 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms