Protein–RNA interactions for Protein: Q9UPM8

AP4E1, AP-4 complex subunit epsilon-1, humanhuman

Predictions only

Length 1,137 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1Q9UPM8 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4E1Q9UPM8 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
AP4E1Q9UPM8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4E1Q9UPM8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4E1Q9UPM8 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
AP4E1Q9UPM8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 RPS2P55-201ENST00000397318 883 ntBASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 AC012618.2-201ENST00000428058 849 ntBASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 AC107956.1-201ENST00000494359 873 ntBASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 CD177P1-201ENST00000606252 935 ntBASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 FEM1AP3-201ENST00000403722 1741 ntBASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.84■□□□□ 0.77
AP4E1Q9UPM8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
AP4E1Q9UPM8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
AP4E1Q9UPM8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP4E1Q9UPM8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
AP4E1Q9UPM8 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
AP4E1Q9UPM8 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
AP4E1Q9UPM8 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.83■□□□□ 0.77
AP4E1Q9UPM8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.83■□□□□ 0.77
AP4E1Q9UPM8 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
AP4E1Q9UPM8 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.83■□□□□ 0.77
AP4E1Q9UPM8 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.83■□□□□ 0.77
AP4E1Q9UPM8 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
AP4E1Q9UPM8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.83■□□□□ 0.77
AP4E1Q9UPM8 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
AP4E1Q9UPM8 AC233702.5-201ENST00000584107 538 ntBASIC19.83■□□□□ 0.77
AP4E1Q9UPM8 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.83■□□□□ 0.76
AP4E1Q9UPM8 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
AP4E1Q9UPM8 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.83■□□□□ 0.76
AP4E1Q9UPM8 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP4E1Q9UPM8 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP4E1Q9UPM8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.83■□□□□ 0.76
AP4E1Q9UPM8 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP4E1Q9UPM8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
AP4E1Q9UPM8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 AC004951.3-201ENST00000418645 1148 ntBASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 AC091390.4-202ENST00000476426 537 ntBASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 AC113410.3-201ENST00000623366 203 ntBASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
AP4E1Q9UPM8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 AC011298.2-201ENST00000617989 482 ntBASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 AL049637.2-201ENST00000641778 930 ntBASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
AP4E1Q9UPM8 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms