Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.06■□□□□ 0.48
LHX6Q9UPM6 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC18.06■□□□□ 0.48
LHX6Q9UPM6 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LHX6Q9UPM6 AP002414.4-201ENST00000589764 1148 ntBASIC18.06■□□□□ 0.48
LHX6Q9UPM6 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LHX6Q9UPM6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
LHX6Q9UPM6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LHX6Q9UPM6 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LHX6Q9UPM6 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LHX6Q9UPM6 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LHX6Q9UPM6 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.06■□□□□ 0.48
LHX6Q9UPM6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LHX6Q9UPM6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LHX6Q9UPM6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 SPDYE15P-201ENST00000424157 909 ntBASIC18.05■□□□□ 0.48
LHX6Q9UPM6 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 AC084866.2-201ENST00000509956 449 ntTSL 2 BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LHX6Q9UPM6 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 BX119927.1-201ENST00000636596 1552 ntBASIC18.04■□□□□ 0.48
LHX6Q9UPM6 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 AP002383.4-201ENST00000442518 975 ntBASIC18.04■□□□□ 0.48
LHX6Q9UPM6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 GCSHP2-201ENST00000560971 527 ntBASIC18.04■□□□□ 0.48
LHX6Q9UPM6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 AC011498.5-201ENST00000592027 486 ntBASIC18.04■□□□□ 0.48
LHX6Q9UPM6 AL121912.1-201ENST00000603683 238 ntBASIC18.04■□□□□ 0.48
LHX6Q9UPM6 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LHX6Q9UPM6 KRT8P17-201ENST00000453110 1448 ntBASIC18.04■□□□□ 0.48
LHX6Q9UPM6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 KRT18P58-201ENST00000527480 1120 ntBASIC18.03■□□□□ 0.48
LHX6Q9UPM6 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 AF106564.1-201ENST00000607058 2553 ntBASIC18.03■□□□□ 0.48
LHX6Q9UPM6 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LHX6Q9UPM6 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.02■□□□□ 0.48
LHX6Q9UPM6 BX842568.4-201ENST00000421222 227 ntBASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms