Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 AL121832.2-201ENST00000610979 668 ntBASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PCDHGB4Q9UN71 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 AC006970.2-201ENST00000450065 779 ntBASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 AC005829.2-201ENST00000571422 1056 ntBASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PCDHGB4Q9UN71 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 MIPEPP3-201ENST00000412105 444 ntBASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 AC073210.2-201ENST00000430369 194 ntBASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 AC083906.2-201ENST00000511578 360 ntBASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 DLX3-202ENST00000512495 834 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PCDHGB4Q9UN71 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB4Q9UN71 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB4Q9UN71 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB4Q9UN71 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB4Q9UN71 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.48■□□□□ 0.55
PCDHGB4Q9UN71 TFP1-202ENST00000475455 1573 ntBASIC18.48■□□□□ 0.55
PCDHGB4Q9UN71 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB4Q9UN71 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PCDHGB4Q9UN71 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB4Q9UN71 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PCDHGB4Q9UN71 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB4Q9UN71 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PCDHGB4Q9UN71 SLC29A4P1-201ENST00000398760 971 ntBASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms