Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC30.47■■■□□ 2.47
RIMBP3Q9UFD9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
RIMBP3Q9UFD9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC30.47■■■□□ 2.47
RIMBP3Q9UFD9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC30.47■■■□□ 2.47
RIMBP3Q9UFD9 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC30.47■■■□□ 2.47
RIMBP3Q9UFD9 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC30.47■■■□□ 2.47
RIMBP3Q9UFD9 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
RIMBP3Q9UFD9 DYM-203ENST00000442713 2147 ntTSL 2 BASIC30.46■■■□□ 2.47
RIMBP3Q9UFD9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
RIMBP3Q9UFD9 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC30.46■■■□□ 2.47
RIMBP3Q9UFD9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
RIMBP3Q9UFD9 AC009533.2-201ENST00000543664 586 ntBASIC30.46■■■□□ 2.47
RIMBP3Q9UFD9 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC30.46■■■□□ 2.47
RIMBP3Q9UFD9 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC30.46■■■□□ 2.47
RIMBP3Q9UFD9 AP001269.4-201ENST00000609611 512 ntBASIC30.46■■■□□ 2.47
RIMBP3Q9UFD9 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC30.46■■■□□ 2.47
RIMBP3Q9UFD9 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
RIMBP3Q9UFD9 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC30.45■■■□□ 2.47
RIMBP3Q9UFD9 AL645939.2-201ENST00000427340 991 ntBASIC30.45■■■□□ 2.47
RIMBP3Q9UFD9 GRAMD4P1-201ENST00000435181 1110 ntBASIC30.45■■■□□ 2.47
RIMBP3Q9UFD9 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC30.45■■■□□ 2.47
RIMBP3Q9UFD9 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC30.45■■■□□ 2.46
RIMBP3Q9UFD9 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.46
RIMBP3Q9UFD9 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC30.44■■■□□ 2.46
RIMBP3Q9UFD9 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
RIMBP3Q9UFD9 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC30.44■■■□□ 2.46
RIMBP3Q9UFD9 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC30.44■■■□□ 2.46
RIMBP3Q9UFD9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC30.44■■■□□ 2.46
RIMBP3Q9UFD9 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC30.44■■■□□ 2.46
RIMBP3Q9UFD9 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC30.44■■■□□ 2.46
RIMBP3Q9UFD9 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
RIMBP3Q9UFD9 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RIMBP3Q9UFD9 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC30.44■■■□□ 2.46
RIMBP3Q9UFD9 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC30.44■■■□□ 2.46
RIMBP3Q9UFD9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC30.44■■■□□ 2.46
RIMBP3Q9UFD9 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC30.44■■■□□ 2.46
RIMBP3Q9UFD9 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC30.44■■■□□ 2.46
RIMBP3Q9UFD9 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC30.44■■■□□ 2.46
RIMBP3Q9UFD9 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC30.44■■■□□ 2.46
RIMBP3Q9UFD9 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC30.44■■■□□ 2.46
RIMBP3Q9UFD9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC30.43■■■□□ 2.46
RIMBP3Q9UFD9 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
RIMBP3Q9UFD9 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC30.43■■■□□ 2.46
RIMBP3Q9UFD9 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
RIMBP3Q9UFD9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
RIMBP3Q9UFD9 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
RIMBP3Q9UFD9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
RIMBP3Q9UFD9 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC30.43■■■□□ 2.46
RIMBP3Q9UFD9 MINOS1P3-201ENST00000457048 203 ntBASIC30.43■■■□□ 2.46
RIMBP3Q9UFD9 AL591684.3-201ENST00000605187 298 ntBASIC30.43■■■□□ 2.46
RIMBP3Q9UFD9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
RIMBP3Q9UFD9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC30.43■■■□□ 2.46
RIMBP3Q9UFD9 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
RIMBP3Q9UFD9 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
RIMBP3Q9UFD9 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RIMBP3Q9UFD9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RIMBP3Q9UFD9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RIMBP3Q9UFD9 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
RIMBP3Q9UFD9 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
RIMBP3Q9UFD9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RIMBP3Q9UFD9 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RIMBP3Q9UFD9 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC30.42■■■□□ 2.46
RIMBP3Q9UFD9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC30.42■■■□□ 2.46
RIMBP3Q9UFD9 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC30.42■■■□□ 2.46
RIMBP3Q9UFD9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
RIMBP3Q9UFD9 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RIMBP3Q9UFD9 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RIMBP3Q9UFD9 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RIMBP3Q9UFD9 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
RIMBP3Q9UFD9 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC30.41■■■□□ 2.46
RIMBP3Q9UFD9 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC30.41■■■□□ 2.46
RIMBP3Q9UFD9 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RIMBP3Q9UFD9 POM121L3P-201ENST00000419331 1163 ntBASIC30.41■■■□□ 2.46
RIMBP3Q9UFD9 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RIMBP3Q9UFD9 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC30.41■■■□□ 2.46
RIMBP3Q9UFD9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RIMBP3Q9UFD9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC30.41■■■□□ 2.46
RIMBP3Q9UFD9 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
RIMBP3Q9UFD9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RIMBP3Q9UFD9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RIMBP3Q9UFD9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC30.41■■■□□ 2.46
RIMBP3Q9UFD9 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
RIMBP3Q9UFD9 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC30.4■■■□□ 2.46
RIMBP3Q9UFD9 RNA5SP415-201ENST00000517246 115 ntBASIC30.4■■■□□ 2.46
RIMBP3Q9UFD9 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC30.4■■■□□ 2.46
RIMBP3Q9UFD9 MIR3180-5-201ENST00000583743 153 ntBASIC30.4■■■□□ 2.46
RIMBP3Q9UFD9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC30.4■■■□□ 2.46
RIMBP3Q9UFD9 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC30.4■■■□□ 2.46
RIMBP3Q9UFD9 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC30.4■■■□□ 2.46
RIMBP3Q9UFD9 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC30.4■■■□□ 2.46
RIMBP3Q9UFD9 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
RIMBP3Q9UFD9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC30.4■■■□□ 2.46
RIMBP3Q9UFD9 BCRP1-201ENST00000444246 691 ntBASIC30.4■■■□□ 2.46
RIMBP3Q9UFD9 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC30.4■■■□□ 2.46
RIMBP3Q9UFD9 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC30.4■■■□□ 2.46
RIMBP3Q9UFD9 AC012640.2-201ENST00000561606 901 ntBASIC30.4■■■□□ 2.46
RIMBP3Q9UFD9 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC30.4■■■□□ 2.46
RIMBP3Q9UFD9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
RIMBP3Q9UFD9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC30.39■■■□□ 2.46
RIMBP3Q9UFD9 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC30.39■■■□□ 2.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms