Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 AC091390.4-202ENST00000476426 537 ntBASIC19.01■□□□□ 0.63
SPASTQ9UBP0 Z85996.1-201ENST00000494644 937 ntBASIC19.01■□□□□ 0.63
SPASTQ9UBP0 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SPASTQ9UBP0 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPASTQ9UBP0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19■□□□□ 0.63
SPASTQ9UBP0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19■□□□□ 0.63
SPASTQ9UBP0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPASTQ9UBP0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SPASTQ9UBP0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SPASTQ9UBP0 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19■□□□□ 0.63
SPASTQ9UBP0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SPASTQ9UBP0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC19■□□□□ 0.63
SPASTQ9UBP0 HIST1H2APS4-201ENST00000362070 348 ntBASIC19■□□□□ 0.63
SPASTQ9UBP0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPASTQ9UBP0 CCR12P-201ENST00000446203 998 ntBASIC19■□□□□ 0.63
SPASTQ9UBP0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPASTQ9UBP0 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC19■□□□□ 0.63
SPASTQ9UBP0 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPASTQ9UBP0 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19■□□□□ 0.63
SPASTQ9UBP0 AC010203.1-204ENST00000548782 407 ntBASIC19■□□□□ 0.63
SPASTQ9UBP0 NME3-204ENST00000563498 920 ntTSL 2 BASIC19■□□□□ 0.63
SPASTQ9UBP0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SPASTQ9UBP0 AC116562.4-202ENST00000641738 218 ntBASIC19■□□□□ 0.63
SPASTQ9UBP0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SPASTQ9UBP0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPASTQ9UBP0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
SPASTQ9UBP0 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SPASTQ9UBP0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19■□□□□ 0.63
SPASTQ9UBP0 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPASTQ9UBP0 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPASTQ9UBP0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19■□□□□ 0.63
SPASTQ9UBP0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19■□□□□ 0.63
SPASTQ9UBP0 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.99■□□□□ 0.63
SPASTQ9UBP0 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC18.99■□□□□ 0.63
SPASTQ9UBP0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.98■□□□□ 0.63
SPASTQ9UBP0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 SLC25A1P2-201ENST00000430693 912 ntBASIC18.98■□□□□ 0.63
SPASTQ9UBP0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC18.98■□□□□ 0.63
SPASTQ9UBP0 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.97■□□□□ 0.63
SPASTQ9UBP0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.97■□□□□ 0.63
SPASTQ9UBP0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPASTQ9UBP0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms