Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.64■■□□□ 1.05
COL20A1Q9P218 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21.64■■□□□ 1.05
COL20A1Q9P218 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
COL20A1Q9P218 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.64■■□□□ 1.05
COL20A1Q9P218 AC009947.2-201ENST00000444014 672 ntBASIC21.64■■□□□ 1.05
COL20A1Q9P218 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC21.64■■□□□ 1.05
COL20A1Q9P218 ETFA-216ENST00000560726 942 ntTSL 3 BASIC21.64■■□□□ 1.05
COL20A1Q9P218 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC21.64■■□□□ 1.05
COL20A1Q9P218 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC21.64■■□□□ 1.05
COL20A1Q9P218 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
COL20A1Q9P218 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.64■■□□□ 1.05
COL20A1Q9P218 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL20A1Q9P218 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
COL20A1Q9P218 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.64■■□□□ 1.05
COL20A1Q9P218 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.05
COL20A1Q9P218 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC21.64■■□□□ 1.05
COL20A1Q9P218 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.64■■□□□ 1.05
COL20A1Q9P218 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
COL20A1Q9P218 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
COL20A1Q9P218 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL20A1Q9P218 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL20A1Q9P218 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL20A1Q9P218 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
COL20A1Q9P218 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL20A1Q9P218 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
COL20A1Q9P218 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.63■■□□□ 1.05
COL20A1Q9P218 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL20A1Q9P218 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC21.63■■□□□ 1.05
COL20A1Q9P218 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL20A1Q9P218 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL20A1Q9P218 AL512604.3-201ENST00000569583 964 ntBASIC21.63■■□□□ 1.05
COL20A1Q9P218 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.63■■□□□ 1.05
COL20A1Q9P218 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL20A1Q9P218 CR769767.2-201ENST00000622735 460 ntBASIC21.63■■□□□ 1.05
COL20A1Q9P218 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
COL20A1Q9P218 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
COL20A1Q9P218 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
COL20A1Q9P218 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL20A1Q9P218 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL20A1Q9P218 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL20A1Q9P218 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL20A1Q9P218 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
COL20A1Q9P218 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.62■■□□□ 1.05
COL20A1Q9P218 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL20A1Q9P218 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.62■■□□□ 1.05
COL20A1Q9P218 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL20A1Q9P218 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC21.62■■□□□ 1.05
COL20A1Q9P218 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL20A1Q9P218 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC21.62■■□□□ 1.05
COL20A1Q9P218 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.62■■□□□ 1.05
COL20A1Q9P218 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL20A1Q9P218 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
COL20A1Q9P218 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC21.62■■□□□ 1.05
COL20A1Q9P218 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.62■■□□□ 1.05
COL20A1Q9P218 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.62■■□□□ 1.05
COL20A1Q9P218 KRT18P38-201ENST00000449496 1282 ntBASIC21.62■■□□□ 1.05
COL20A1Q9P218 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
COL20A1Q9P218 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.62■■□□□ 1.05
COL20A1Q9P218 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
COL20A1Q9P218 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
COL20A1Q9P218 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
COL20A1Q9P218 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
COL20A1Q9P218 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
COL20A1Q9P218 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
COL20A1Q9P218 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
COL20A1Q9P218 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.61■■□□□ 1.05
COL20A1Q9P218 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC21.61■■□□□ 1.05
COL20A1Q9P218 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL20A1Q9P218 AL031133.1-201ENST00000406807 723 ntBASIC21.61■■□□□ 1.05
COL20A1Q9P218 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.61■■□□□ 1.05
COL20A1Q9P218 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC21.61■■□□□ 1.05
COL20A1Q9P218 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.61■■□□□ 1.05
COL20A1Q9P218 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.61■■□□□ 1.05
COL20A1Q9P218 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL20A1Q9P218 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
COL20A1Q9P218 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
COL20A1Q9P218 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL20A1Q9P218 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL20A1Q9P218 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL20A1Q9P218 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.6■■□□□ 1.05
COL20A1Q9P218 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
COL20A1Q9P218 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.6■■□□□ 1.05
COL20A1Q9P218 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL20A1Q9P218 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL20A1Q9P218 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL20A1Q9P218 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC21.6■■□□□ 1.05
COL20A1Q9P218 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.6■■□□□ 1.05
COL20A1Q9P218 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
COL20A1Q9P218 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.6■■□□□ 1.05
COL20A1Q9P218 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
COL20A1Q9P218 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL20A1Q9P218 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
COL20A1Q9P218 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL20A1Q9P218 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
COL20A1Q9P218 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.59■■□□□ 1.05
COL20A1Q9P218 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.59■■□□□ 1.05
COL20A1Q9P218 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC21.59■■□□□ 1.05
COL20A1Q9P218 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL20A1Q9P218 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
COL20A1Q9P218 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms