Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
NCKIPSDQ9NZQ3 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 NIFKP9-201ENST00000419265 221 ntBASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC19.32■□□□□ 0.68
NCKIPSDQ9NZQ3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 AC145285.6-201ENST00000604632 637 ntBASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
NCKIPSDQ9NZQ3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 RCN1P1-201ENST00000400413 996 ntBASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 RBM17P1-201ENST00000453646 1190 ntBASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 KRT16P1-201ENST00000399124 1418 ntBASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
NCKIPSDQ9NZQ3 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 REXO1L10P-201ENST00000615707 1290 ntBASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
NCKIPSDQ9NZQ3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms