Protein–RNA interactions for Protein: Q9NZI7

UBP1, Upstream-binding protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBP1Q9NZI7 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 IRX1P1-201ENST00000438849 1838 ntBASIC19.46■□□□□ 0.71
UBP1Q9NZI7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 AF186192.3-201ENST00000583427 947 ntBASIC19.46■□□□□ 0.71
UBP1Q9NZI7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 CR392000.1-201ENST00000624770 1228 ntBASIC19.46■□□□□ 0.71
UBP1Q9NZI7 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 BX323043.1-201ENST00000641006 1765 ntBASIC19.46■□□□□ 0.71
UBP1Q9NZI7 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
UBP1Q9NZI7 TNXA-203ENST00000507684 2038 ntBASIC19.46■□□□□ 0.71
UBP1Q9NZI7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 AL445675.2-201ENST00000620291 557 ntBASIC19.45■□□□□ 0.7
UBP1Q9NZI7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 KRT8P41-201ENST00000533985 1514 ntBASIC19.45■□□□□ 0.7
UBP1Q9NZI7 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
UBP1Q9NZI7 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 AC020763.4-201ENST00000623414 4170 ntBASIC19.44■□□□□ 0.7
UBP1Q9NZI7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 AC004980.1-204ENST00000429707 299 ntBASIC19.44■□□□□ 0.7
UBP1Q9NZI7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 Z85996.1-201ENST00000494644 937 ntBASIC19.44■□□□□ 0.7
UBP1Q9NZI7 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 RARRES2P10-201ENST00000564312 460 ntBASIC19.44■□□□□ 0.7
UBP1Q9NZI7 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.44■□□□□ 0.7
UBP1Q9NZI7 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms