Protein–RNA interactions for Protein: Q9NW08

POLR3B, DNA-directed RNA polymerase III subunit RPC2, humanhuman

Predicted RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3BQ9NW08 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 FAM8A6P-201ENST00000407496 1135 ntBASIC19.67■□□□□ 0.74
POLR3BQ9NW08 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
POLR3BQ9NW08 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR3BQ9NW08 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR3BQ9NW08 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.66■□□□□ 0.74
POLR3BQ9NW08 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR3BQ9NW08 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
POLR3BQ9NW08 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.66■□□□□ 0.74
POLR3BQ9NW08 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
POLR3BQ9NW08 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.66■□□□□ 0.74
POLR3BQ9NW08 AC091076.1-201ENST00000610741 619 ntBASIC19.66■□□□□ 0.74
POLR3BQ9NW08 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR3BQ9NW08 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
POLR3BQ9NW08 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
POLR3BQ9NW08 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
POLR3BQ9NW08 AC092338.2-201ENST00000568827 1415 ntBASIC19.66■□□□□ 0.74
POLR3BQ9NW08 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.66■□□□□ 0.74
POLR3BQ9NW08 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.66■□□□□ 0.74
POLR3BQ9NW08 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR3BQ9NW08 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
POLR3BQ9NW08 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 COX11P1-201ENST00000489116 835 ntBASIC19.65■□□□□ 0.74
POLR3BQ9NW08 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 AL023803.3-201ENST00000615559 522 ntBASIC19.65■□□□□ 0.74
POLR3BQ9NW08 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 AC141257.4-201ENST00000634557 245 ntBASIC19.65■□□□□ 0.74
POLR3BQ9NW08 AC136944.6-201ENST00000634818 245 ntBASIC19.65■□□□□ 0.74
POLR3BQ9NW08 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.65■□□□□ 0.74
POLR3BQ9NW08 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 TREX1-205ENST00000625293 1783 ntBASIC19.65■□□□□ 0.74
POLR3BQ9NW08 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.65■□□□□ 0.74
POLR3BQ9NW08 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
POLR3BQ9NW08 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.64■□□□□ 0.74
POLR3BQ9NW08 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.64■□□□□ 0.74
POLR3BQ9NW08 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.64■□□□□ 0.74
POLR3BQ9NW08 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
POLR3BQ9NW08 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 CCR12P-201ENST00000446203 998 ntBASIC19.64■□□□□ 0.73
POLR3BQ9NW08 KRT18P56-201ENST00000507275 550 ntBASIC19.64■□□□□ 0.73
POLR3BQ9NW08 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
POLR3BQ9NW08 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.63■□□□□ 0.73
POLR3BQ9NW08 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR3BQ9NW08 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR3BQ9NW08 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR3BQ9NW08 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.63■□□□□ 0.73
POLR3BQ9NW08 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR3BQ9NW08 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR3BQ9NW08 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.63■□□□□ 0.73
POLR3BQ9NW08 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms