Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 AC138932.1-201ENST00000534164 6830 ntBASIC17.81■□□□□ 0.44
RLIMQ9NVW2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RLIMQ9NVW2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 TUBB8P6-201ENST00000436895 1288 ntBASIC17.8■□□□□ 0.44
RLIMQ9NVW2 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.8■□□□□ 0.44
RLIMQ9NVW2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 AC005332.8-201ENST00000622750 2735 ntBASIC17.8■□□□□ 0.44
RLIMQ9NVW2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RLIMQ9NVW2 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 FP475955.4-201ENST00000623131 1990 ntBASIC17.79■□□□□ 0.44
RLIMQ9NVW2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.79■□□□□ 0.44
RLIMQ9NVW2 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 AP003097.1-201ENST00000530657 1135 ntBASIC17.78■□□□□ 0.44
RLIMQ9NVW2 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 AC233263.1-201ENST00000578059 224 ntBASIC17.78■□□□□ 0.44
RLIMQ9NVW2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.78■□□□□ 0.44
RLIMQ9NVW2 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms