Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
LIN7CQ9NUP9 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 AC006333.2-201ENST00000607957 2099 ntBASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
LIN7CQ9NUP9 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 TFP1-202ENST00000475455 1573 ntBASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 AC026366.1-201ENST00000488803 879 ntBASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 OR6D1P-202ENST00000641007 5290 ntBASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LIN7CQ9NUP9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 NEFHP1-201ENST00000412845 2629 ntBASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 AC008687.6-201ENST00000596318 630 ntBASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 AC006557.6-201ENST00000623071 864 ntBASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LIN7CQ9NUP9 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms