Protein–RNA interactions for Protein: Q9NSC5

HOMER3, Homer protein homolog 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3Q9NSC5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 SLC29A4P1-201ENST00000398760 971 ntBASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 AC097658.1-201ENST00000475555 843 ntBASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.9■□□□□ 0.78
HOMER3Q9NSC5 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
HOMER3Q9NSC5 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HOMER3Q9NSC5 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HOMER3Q9NSC5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HOMER3Q9NSC5 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.78
HOMER3Q9NSC5 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.89■□□□□ 0.77
HOMER3Q9NSC5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 AC006970.2-201ENST00000450065 779 ntBASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 RHEB-204ENST00000472642 900 ntTSL 3 BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 AC060766.5-201ENST00000590539 871 ntBASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 IKBKGP1-201ENST00000612193 1073 ntBASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 AC120498.8-201ENST00000614275 531 ntBASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HOMER3Q9NSC5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOMER3Q9NSC5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOMER3Q9NSC5 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOMER3Q9NSC5 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HOMER3Q9NSC5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOMER3Q9NSC5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOMER3Q9NSC5 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
HOMER3Q9NSC5 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOMER3Q9NSC5 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
HOMER3Q9NSC5 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOMER3Q9NSC5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.87■□□□□ 0.77
HOMER3Q9NSC5 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HOMER3Q9NSC5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms