Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
NLRC4Q9NPP4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
NLRC4Q9NPP4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.7■□□□□ 0.91
NLRC4Q9NPP4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.91
NLRC4Q9NPP4 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
NLRC4Q9NPP4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 AP003097.1-201ENST00000530657 1135 ntBASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 AC233263.1-201ENST00000578059 224 ntBASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
NLRC4Q9NPP4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 ID1-201ENST00000376105 1233 ntBASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 FEM1AP3-201ENST00000403722 1741 ntBASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC20.69■□□□□ 0.9
NLRC4Q9NPP4 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms