Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 TSPY21P-201ENST00000433481 731 ntBASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 AC098590.1-201ENST00000468126 897 ntBASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 RPS2P4-201ENST00000476944 856 ntBASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NEUROD4Q9HD90 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 FEM1AP3-201ENST00000403722 1741 ntBASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 AC239809.2-201ENST00000415381 517 ntBASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 AC006058.3-201ENST00000606217 1069 ntBASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 HLA-A-209ENST00000638375 975 ntBASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
NEUROD4Q9HD90 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 CROCCP3-202ENST00000420820 1947 ntBASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 AL160286.2-201ENST00000567150 934 ntBASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
NEUROD4Q9HD90 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NEUROD4Q9HD90 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
NEUROD4Q9HD90 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
NEUROD4Q9HD90 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
NEUROD4Q9HD90 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
NEUROD4Q9HD90 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
NEUROD4Q9HD90 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18■□□□□ 0.47
NEUROD4Q9HD90 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18■□□□□ 0.47
NEUROD4Q9HD90 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms