Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CBX8Q9HC52 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CBX8Q9HC52 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CBX8Q9HC52 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC21.35■■□□□ 1.01
CBX8Q9HC52 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CBX8Q9HC52 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.35■■□□□ 1.01
CBX8Q9HC52 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CBX8Q9HC52 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.35■■□□□ 1.01
CBX8Q9HC52 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CBX8Q9HC52 AC073210.2-201ENST00000430369 194 ntBASIC21.35■■□□□ 1.01
CBX8Q9HC52 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CBX8Q9HC52 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.35■■□□□ 1.01
CBX8Q9HC52 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.35■■□□□ 1.01
CBX8Q9HC52 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CBX8Q9HC52 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC21.35■■□□□ 1.01
CBX8Q9HC52 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
CBX8Q9HC52 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CBX8Q9HC52 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.35■■□□□ 1.01
CBX8Q9HC52 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CBX8Q9HC52 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.35■■□□□ 1.01
CBX8Q9HC52 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
CBX8Q9HC52 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
CBX8Q9HC52 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.34■■□□□ 1.01
CBX8Q9HC52 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CBX8Q9HC52 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CBX8Q9HC52 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CBX8Q9HC52 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CBX8Q9HC52 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CBX8Q9HC52 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC21.34■■□□□ 1.01
CBX8Q9HC52 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CBX8Q9HC52 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.34■■□□□ 1.01
CBX8Q9HC52 PLD4-205ENST00000553861 667 ntTSL 2 BASIC21.34■■□□□ 1.01
CBX8Q9HC52 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.34■■□□□ 1.01
CBX8Q9HC52 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CBX8Q9HC52 AC087623.3-201ENST00000607047 1098 ntBASIC21.34■■□□□ 1.01
CBX8Q9HC52 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
CBX8Q9HC52 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.34■■□□□ 1.01
CBX8Q9HC52 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CBX8Q9HC52 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.34■■□□□ 1.01
CBX8Q9HC52 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CBX8Q9HC52 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
CBX8Q9HC52 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CBX8Q9HC52 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CBX8Q9HC52 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CBX8Q9HC52 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
CBX8Q9HC52 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CBX8Q9HC52 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.33■■□□□ 1.01
CBX8Q9HC52 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
CBX8Q9HC52 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CBX8Q9HC52 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC21.33■■□□□ 1.01
CBX8Q9HC52 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CBX8Q9HC52 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CBX8Q9HC52 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC21.33■■□□□ 1.01
CBX8Q9HC52 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CBX8Q9HC52 AC005829.2-201ENST00000571422 1056 ntBASIC21.33■■□□□ 1.01
CBX8Q9HC52 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CBX8Q9HC52 AC005181.1-201ENST00000604782 1256 ntBASIC21.33■■□□□ 1.01
CBX8Q9HC52 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CBX8Q9HC52 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CBX8Q9HC52 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CBX8Q9HC52 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.33■■□□□ 1
CBX8Q9HC52 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CBX8Q9HC52 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CBX8Q9HC52 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.33■■□□□ 1
CBX8Q9HC52 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC21.33■■□□□ 1
CBX8Q9HC52 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC21.33■■□□□ 1
CBX8Q9HC52 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CBX8Q9HC52 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CBX8Q9HC52 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CBX8Q9HC52 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.32■■□□□ 1
CBX8Q9HC52 AC126763.1-201ENST00000552015 2118 ntBASIC21.32■■□□□ 1
CBX8Q9HC52 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CBX8Q9HC52 FZD10-202ENST00000539839 3282 ntBASIC21.32■■□□□ 1
CBX8Q9HC52 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CBX8Q9HC52 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CBX8Q9HC52 AL390719.1-204ENST00000412397 1219 ntBASIC21.32■■□□□ 1
CBX8Q9HC52 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.32■■□□□ 1
CBX8Q9HC52 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.32■■□□□ 1
CBX8Q9HC52 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CBX8Q9HC52 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.32■■□□□ 1
CBX8Q9HC52 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.32■■□□□ 1
CBX8Q9HC52 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CBX8Q9HC52 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CBX8Q9HC52 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.32■■□□□ 1
CBX8Q9HC52 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
CBX8Q9HC52 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.31■■□□□ 1
CBX8Q9HC52 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CBX8Q9HC52 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC21.31■■□□□ 1
CBX8Q9HC52 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.31■■□□□ 1
CBX8Q9HC52 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CBX8Q9HC52 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CBX8Q9HC52 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CBX8Q9HC52 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CBX8Q9HC52 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CBX8Q9HC52 ME3-201ENST00000323418 1068 ntTSL 5 BASIC21.31■■□□□ 1
CBX8Q9HC52 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.31■■□□□ 1
CBX8Q9HC52 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.31■■□□□ 1
CBX8Q9HC52 MIR6821-201ENST00000617625 74 ntBASIC21.31■■□□□ 1
CBX8Q9HC52 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.31■■□□□ 1
CBX8Q9HC52 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms