Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ELL3Q9HB65 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ELL3Q9HB65 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ELL3Q9HB65 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ELL3Q9HB65 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.66■□□□□ 0.26
ELL3Q9HB65 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ELL3Q9HB65 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ELL3Q9HB65 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ELL3Q9HB65 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC16.66■□□□□ 0.26
ELL3Q9HB65 DENND3-207ENST00000518347 850 ntTSL 2 BASIC16.66■□□□□ 0.26
ELL3Q9HB65 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.66■□□□□ 0.26
ELL3Q9HB65 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC16.66■□□□□ 0.26
ELL3Q9HB65 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ELL3Q9HB65 AC093503.3-201ENST00000624917 2352 ntBASIC16.66■□□□□ 0.26
ELL3Q9HB65 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ELL3Q9HB65 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ELL3Q9HB65 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
ELL3Q9HB65 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
ELL3Q9HB65 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ELL3Q9HB65 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ELL3Q9HB65 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ELL3Q9HB65 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ELL3Q9HB65 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ELL3Q9HB65 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
ELL3Q9HB65 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ELL3Q9HB65 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ELL3Q9HB65 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ELL3Q9HB65 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
ELL3Q9HB65 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.65■□□□□ 0.26
ELL3Q9HB65 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.65■□□□□ 0.26
ELL3Q9HB65 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
ELL3Q9HB65 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ELL3Q9HB65 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.65■□□□□ 0.26
ELL3Q9HB65 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
ELL3Q9HB65 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC16.65■□□□□ 0.26
ELL3Q9HB65 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.65■□□□□ 0.26
ELL3Q9HB65 RNA5SP413-201ENST00000516373 109 ntBASIC16.65■□□□□ 0.26
ELL3Q9HB65 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.65■□□□□ 0.26
ELL3Q9HB65 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC16.65■□□□□ 0.26
ELL3Q9HB65 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ELL3Q9HB65 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.65■□□□□ 0.26
ELL3Q9HB65 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
ELL3Q9HB65 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
ELL3Q9HB65 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ELL3Q9HB65 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
ELL3Q9HB65 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ELL3Q9HB65 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ELL3Q9HB65 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
ELL3Q9HB65 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
ELL3Q9HB65 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
ELL3Q9HB65 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ELL3Q9HB65 AC092368.3-202ENST00000574180 1591 ntBASIC16.64■□□□□ 0.25
ELL3Q9HB65 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ELL3Q9HB65 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ELL3Q9HB65 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ELL3Q9HB65 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ELL3Q9HB65 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ELL3Q9HB65 RER1-204ENST00000378518 522 ntTSL 3 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 AC006557.6-201ENST00000623071 864 ntBASIC16.64■□□□□ 0.25
ELL3Q9HB65 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ELL3Q9HB65 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
ELL3Q9HB65 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
ELL3Q9HB65 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ELL3Q9HB65 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ELL3Q9HB65 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
ELL3Q9HB65 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
ELL3Q9HB65 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
ELL3Q9HB65 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ELL3Q9HB65 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ELL3Q9HB65 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ELL3Q9HB65 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ELL3Q9HB65 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
ELL3Q9HB65 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ELL3Q9HB65 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC16.63■□□□□ 0.25
ELL3Q9HB65 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ELL3Q9HB65 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
ELL3Q9HB65 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ELL3Q9HB65 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ELL3Q9HB65 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
ELL3Q9HB65 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.63■□□□□ 0.25
ELL3Q9HB65 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms