Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 AC006333.2-201ENST00000607957 2099 ntBASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
LRRC40Q9H9A6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC40Q9H9A6 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC40Q9H9A6 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC40Q9H9A6 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC40Q9H9A6 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.4■□□□□ 0.7
LRRC40Q9H9A6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LRRC40Q9H9A6 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRC40Q9H9A6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.4■□□□□ 0.7
LRRC40Q9H9A6 CROCCP3-202ENST00000420820 1947 ntBASIC19.4■□□□□ 0.7
LRRC40Q9H9A6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC40Q9H9A6 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
LRRC40Q9H9A6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
LRRC40Q9H9A6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.4■□□□□ 0.7
LRRC40Q9H9A6 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRRC40Q9H9A6 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.39■□□□□ 0.7
LRRC40Q9H9A6 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
LRRC40Q9H9A6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.39■□□□□ 0.7
LRRC40Q9H9A6 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LRRC40Q9H9A6 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 C1QBPP2-201ENST00000528754 825 ntBASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 AL445675.2-201ENST00000620291 557 ntBASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
LRRC40Q9H9A6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC40Q9H9A6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRC40Q9H9A6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC40Q9H9A6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRC40Q9H9A6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRC40Q9H9A6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
LRRC40Q9H9A6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.38■□□□□ 0.69
LRRC40Q9H9A6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.38■□□□□ 0.69
LRRC40Q9H9A6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
LRRC40Q9H9A6 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
LRRC40Q9H9A6 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.38■□□□□ 0.69
LRRC40Q9H9A6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
LRRC40Q9H9A6 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.38■□□□□ 0.69
LRRC40Q9H9A6 AL138781.2-201ENST00000617896 1843 ntBASIC19.38■□□□□ 0.69
LRRC40Q9H9A6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.38■□□□□ 0.69
LRRC40Q9H9A6 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
LRRC40Q9H9A6 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms